Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC7.85□□□□□ -1.15
SCUBE3Q8IX30 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
SCUBE3Q8IX30 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SCUBE3Q8IX30 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SCUBE3Q8IX30 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
SCUBE3Q8IX30 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.85□□□□□ -1.15
SCUBE3Q8IX30 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
SCUBE3Q8IX30 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SCUBE3Q8IX30 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC7.85□□□□□ -1.15
SCUBE3Q8IX30 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
SCUBE3Q8IX30 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SCUBE3Q8IX30 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.85□□□□□ -1.15
SCUBE3Q8IX30 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
SCUBE3Q8IX30 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.85□□□□□ -1.15
SCUBE3Q8IX30 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SCUBE3Q8IX30 AP000766.1-201ENST00000561746 4140 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AC009948.3-201ENST00000603415 1798 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 SAMMSON-203ENST00000641005 2168 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 CCDC162P-202ENST00000368966 6751 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 RNU6-216P-201ENST00000363282 104 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 RNU6-619P-201ENST00000365146 108 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 Y_RNA.381-201ENST00000365666 102 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 Y_RNA.395-201ENST00000383945 109 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 MIR27A-201ENST00000385073 78 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AL450338.1-201ENST00000407987 512 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 MIR1302-3-201ENST00000408128 138 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AL450992.3-201ENST00000413192 568 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 RBM6-203ENST00000421682 684 ntTSL 2 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 HSPE1P16-201ENST00000426640 348 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AC073335.1-201ENST00000427776 363 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 LIN28AP2-201ENST00000445283 458 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 RPL26P28-201ENST00000451325 435 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AC013429.1-201ENST00000456604 422 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 RPS27AP17-201ENST00000463344 455 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 RN7SL228P-201ENST00000470060 303 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AL135752.1-201ENST00000479477 471 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AC022296.2-201ENST00000512424 202 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 RNA5SP401-201ENST00000515920 127 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 IGKV2-29-201ENST00000521304 372 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 CASP1-216ENST00000534497 825 ntTSL 5 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 TRAV15-201ENST00000556680 249 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AC138749.2-201ENST00000566048 167 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 MIR4742-201ENST00000581069 85 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 NUTF2P8-201ENST00000604593 363 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 MIR98-201ENST00000606724 119 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AC008115.3-201ENST00000614874 549 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AC084781.2-201ENST00000615568 161 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 AC243830.2-201ENST00000618067 630 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 HBG1-202ENST00000632727 369 ntTSL 3 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 TRIM51HP-202ENST00000530412 1823 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 RBPJP7-201ENST00000442803 1447 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 RBPJP5-201ENST00000449433 1447 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 ZNF840P-201ENST00000504759 1996 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 MTCO1P14-201ENST00000441695 1559 ntBASIC7.84□□□□□ -1.15
SCUBE3Q8IX30 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.16
SCUBE3Q8IX30 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCUBE3Q8IX30 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCUBE3Q8IX30 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCUBE3Q8IX30 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.83□□□□□ -1.16
SCUBE3Q8IX30 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCUBE3Q8IX30 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SCUBE3Q8IX30 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCUBE3Q8IX30 HSPA8P11-201ENST00000508840 1898 ntBASIC7.83□□□□□ -1.16
SCUBE3Q8IX30 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCUBE3Q8IX30 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms