Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AL512661.1-201ENST00000434586 1253 ntBASIC5.66□□□□□ -1.5
RFX6Q8HWS3 AL450023.1-201ENST00000450868 751 ntBASIC5.66□□□□□ -1.5
RFX6Q8HWS3 AC239798.3-201ENST00000454459 408 ntBASIC5.66□□□□□ -1.5
RFX6Q8HWS3 RPL32P14-201ENST00000463196 378 ntBASIC5.66□□□□□ -1.5
RFX6Q8HWS3 AC094085.1-201ENST00000468914 584 ntBASIC5.66□□□□□ -1.5
RFX6Q8HWS3 NPM1P29-201ENST00000483112 803 ntBASIC5.66□□□□□ -1.5
RFX6Q8HWS3 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 HMGB1P3-201ENST00000502802 616 ntBASIC5.66□□□□□ -1.5
RFX6Q8HWS3 IGBP1P4-201ENST00000503202 879 ntBASIC5.66□□□□□ -1.5
RFX6Q8HWS3 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 HMGN1P9-201ENST00000515212 298 ntBASIC5.66□□□□□ -1.5
RFX6Q8HWS3 RNU5A-7P-201ENST00000515979 116 ntBASIC5.66□□□□□ -1.5
RFX6Q8HWS3 RN7SKP99-201ENST00000517028 307 ntBASIC5.66□□□□□ -1.5
RFX6Q8HWS3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 AL049872.1-201ENST00000556323 322 ntBASIC5.66□□□□□ -1.5
RFX6Q8HWS3 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 AC097655.1-201ENST00000635075 318 ntBASIC5.66□□□□□ -1.5
RFX6Q8HWS3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFX6Q8HWS3 AC245100.2-201ENST00000454544 1679 ntBASIC5.66□□□□□ -1.5
RFX6Q8HWS3 LINC01963-201ENST00000562038 3148 ntBASIC5.65□□□□□ -1.5
RFX6Q8HWS3 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 OR13C1P-202ENST00000641378 2919 ntBASIC5.65□□□□□ -1.5
RFX6Q8HWS3 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 RN7SKP28-201ENST00000364770 305 ntBASIC5.65□□□□□ -1.5
RFX6Q8HWS3 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 OR6E1P-201ENST00000414424 923 ntBASIC5.65□□□□□ -1.5
RFX6Q8HWS3 AKR1B10P1-201ENST00000425765 942 ntBASIC5.65□□□□□ -1.5
RFX6Q8HWS3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 AC007563.3-201ENST00000433233 371 ntBASIC5.65□□□□□ -1.5
RFX6Q8HWS3 SUMO2P3-201ENST00000438311 288 ntBASIC5.65□□□□□ -1.5
RFX6Q8HWS3 AC004854.1-201ENST00000440356 349 ntBASIC5.65□□□□□ -1.5
RFX6Q8HWS3 SNRPFP2-201ENST00000440710 251 ntBASIC5.65□□□□□ -1.5
RFX6Q8HWS3 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 MTND6P2-201ENST00000512226 524 ntBASIC5.65□□□□□ -1.5
RFX6Q8HWS3 RN7SKP70-201ENST00000516655 271 ntBASIC5.65□□□□□ -1.5
RFX6Q8HWS3 SCARNA20.4-201ENST00000516969 131 ntBASIC5.65□□□□□ -1.5
RFX6Q8HWS3 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 OR11H3P-201ENST00000554547 982 ntBASIC5.65□□□□□ -1.5
RFX6Q8HWS3 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 AP002884.5-201ENST00000595053 1132 ntBASIC5.65□□□□□ -1.5
RFX6Q8HWS3 AC012616.1-201ENST00000600294 197 ntBASIC5.65□□□□□ -1.5
RFX6Q8HWS3 AL118522.2-201ENST00000616045 615 ntBASIC5.65□□□□□ -1.5
RFX6Q8HWS3 AC135068.5-201ENST00000624197 983 ntBASIC5.65□□□□□ -1.5
RFX6Q8HWS3 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.65□□□□□ -1.5
RFX6Q8HWS3 AC013437.2-201ENST00000639587 677 ntBASIC5.65□□□□□ -1.5
RFX6Q8HWS3 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
RFX6Q8HWS3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
RFX6Q8HWS3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RFX6Q8HWS3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
RFX6Q8HWS3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
RFX6Q8HWS3 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RFX6Q8HWS3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RFX6Q8HWS3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RFX6Q8HWS3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFX6Q8HWS3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms