Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL935212.3-201ENST00000450729 284 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AC023141.9-201ENST00000458734 412 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AC096992.1-201ENST00000459808 709 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 MTCO2P6-201ENST00000463134 685 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AC092865.4-201ENST00000477936 615 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AC069528.1-202ENST00000482888 637 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 MTCO3P35-201ENST00000485582 781 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 RN7SL284P-201ENST00000498823 275 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 MTND2P38-201ENST00000522536 667 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 CSNK1A1P1-202ENST00000563423 981 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AL035411.2-201ENST00000604022 421 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AC009948.4-201ENST00000604692 675 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AC093388.1-201ENST00000609166 430 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 BX649567.1-201ENST00000642071 1134 ntBASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC144BQ3MJ40 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 WDR95P-201ENST00000425638 1542 ntBASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 RNU1-150P-201ENST00000362491 162 ntBASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 RNU4-28P-201ENST00000364739 141 ntBASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 AL136310.1-201ENST00000404926 654 ntBASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 AL590290.1-201ENST00000405336 380 ntBASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 TAF13P2-201ENST00000416876 286 ntBASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 AL590399.2-201ENST00000427536 309 ntBASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 RPS24P8-201ENST00000431490 402 ntBASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 AC010627.1-201ENST00000503819 1294 ntBASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 AC079600.1-201ENST00000550326 297 ntBASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 AC007346.2-201ENST00000564816 892 ntBASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 NIFKP6-201ENST00000598115 845 ntBASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 ELOCP35-201ENST00000604289 336 ntBASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 AL138478.1-201ENST00000612252 832 ntBASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 AC074140.1-201ENST00000621617 208 ntBASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 AC011330.2-201ENST00000621680 635 ntBASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 FRG1EP-201ENST00000634469 770 ntBASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 AC003992.1-201ENST00000635364 557 ntBASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 SAMMSON-209ENST00000641222 1100 ntBASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 RARSP1-201ENST00000542842 1418 ntBASIC6.93□□□□□ -1.3
CCDC144BQ3MJ40 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 AC020633.1-201ENST00000468439 2247 ntBASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
CCDC144BQ3MJ40 RNU6-353P-201ENST00000364266 108 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms