Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SCN1BQ07699 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.92□□□□□ -1.62
SCN1BQ07699 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.92□□□□□ -1.62
SCN1BQ07699 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.92□□□□□ -1.62
SCN1BQ07699 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SCN1BQ07699 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.92□□□□□ -1.62
SCN1BQ07699 SNORA31.13-201ENST00000516624 135 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.92□□□□□ -1.62
SCN1BQ07699 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.92□□□□□ -1.62
SCN1BQ07699 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.92□□□□□ -1.62
SCN1BQ07699 AP003396.4-201ENST00000527574 265 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.92□□□□□ -1.62
SCN1BQ07699 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.92□□□□□ -1.62
SCN1BQ07699 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SCN1BQ07699 AC139697.1-201ENST00000548429 745 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.92□□□□□ -1.62
SCN1BQ07699 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.92□□□□□ -1.62
SCN1BQ07699 AC002519.2-203ENST00000567043 837 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.92□□□□□ -1.62
SCN1BQ07699 DPRXP4-201ENST00000578053 568 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 DHFRP1-201ENST00000579682 559 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.92□□□□□ -1.62
SCN1BQ07699 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.92□□□□□ -1.62
SCN1BQ07699 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.92□□□□□ -1.62
SCN1BQ07699 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.92□□□□□ -1.62
SCN1BQ07699 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.92□□□□□ -1.62
SCN1BQ07699 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.92□□□□□ -1.62
SCN1BQ07699 AL162574.2-201ENST00000614618 657 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 AC024884.1-201ENST00000620583 399 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 uc_338.7-201ENST00000621834 124 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 AL136228.1-201ENST00000622221 319 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.92□□□□□ -1.62
SCN1BQ07699 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.92□□□□□ -1.62
SCN1BQ07699 AP001052.1-201ENST00000626421 99 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.92□□□□□ -1.62
SCN1BQ07699 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SCN1BQ07699 TMEM30CP-203ENST00000637814 1035 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.92□□□□□ -1.62
SCN1BQ07699 CASC19-274ENST00000642018 970 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SCN1BQ07699 ZNF90P1-201ENST00000480493 1951 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SCN1BQ07699 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SCN1BQ07699 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN1BQ07699 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN1BQ07699 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN1BQ07699 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN1BQ07699 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SCN1BQ07699 AC096656.1-201ENST00000623826 1364 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 AL034370.1-201ENST00000397254 1590 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 AC011447.7-201ENST00000624228 1590 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 SMG1P6-201ENST00000532337 2930 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SCN1BQ07699 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCN1BQ07699 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.91□□□□□ -1.62
SCN1BQ07699 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCN1BQ07699 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.91□□□□□ -1.62
SCN1BQ07699 AC004817.4-201ENST00000602396 3625 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
SCN1BQ07699 AC011155.1-201ENST00000316512 456 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 RN7SKP171-201ENST00000364417 303 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCN1BQ07699 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SCN1BQ07699 AC013404.1-201ENST00000413068 249 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.91□□□□□ -1.62
SCN1BQ07699 RPL35AP3-201ENST00000414680 288 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN1BQ07699 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN1BQ07699 BX119904.1-201ENST00000432026 348 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.91□□□□□ -1.62
SCN1BQ07699 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SCN1BQ07699 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN1BQ07699 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN1BQ07699 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.91□□□□□ -1.62
SCN1BQ07699 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCN1BQ07699 OR7E116P-201ENST00000448529 957 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.91□□□□□ -1.62
SCN1BQ07699 EIF4A1P11-201ENST00000451239 222 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 RPL23AP23-201ENST00000452590 471 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 AC073476.1-201ENST00000452854 407 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 NXT1P1-201ENST00000458481 316 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.91□□□□□ -1.62
SCN1BQ07699 RN7SL515P-201ENST00000463999 297 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 AC023194.2-201ENST00000465398 406 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.91□□□□□ -1.62
SCN1BQ07699 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.91□□□□□ -1.62
SCN1BQ07699 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN1BQ07699 AC018797.1-201ENST00000510791 255 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN1BQ07699 EIF3KP3-201ENST00000514461 639 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 RN7SKP141-201ENST00000516167 338 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.91□□□□□ -1.62
SCN1BQ07699 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN1BQ07699 AL390334.1-201ENST00000556395 450 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCN1BQ07699 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.91□□□□□ -1.62
SCN1BQ07699 AL390726.5-202ENST00000564800 256 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SCN1BQ07699 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN1BQ07699 AC092266.1-201ENST00000610958 165 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms