Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
UBA52P62987 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
UBA52P62987 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.49□□□□□ -1.69
UBA52P62987 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.49□□□□□ -1.69
UBA52P62987 U8.4-201ENST00000363626 134 ntBASIC4.49□□□□□ -1.69
UBA52P62987 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
UBA52P62987 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
UBA52P62987 MIR765-201ENST00000390226 114 ntBASIC4.49□□□□□ -1.69
UBA52P62987 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.49□□□□□ -1.69
UBA52P62987 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.49□□□□□ -1.69
UBA52P62987 OR52B5P-201ENST00000435337 951 ntBASIC4.49□□□□□ -1.69
UBA52P62987 AC245047.2-201ENST00000441060 530 ntBASIC4.49□□□□□ -1.69
UBA52P62987 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.49□□□□□ -1.69
UBA52P62987 BTF3P6-201ENST00000448054 499 ntBASIC4.49□□□□□ -1.69
UBA52P62987 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.49□□□□□ -1.69
UBA52P62987 CYCSP34-201ENST00000458172 304 ntBASIC4.49□□□□□ -1.69
UBA52P62987 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.49□□□□□ -1.69
UBA52P62987 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.49□□□□□ -1.69
UBA52P62987 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.49□□□□□ -1.69
UBA52P62987 CDH12P4-201ENST00000517835 295 ntBASIC4.49□□□□□ -1.69
UBA52P62987 CDH12P3-201ENST00000517935 295 ntBASIC4.49□□□□□ -1.69
UBA52P62987 CDH12P1-201ENST00000518435 295 ntBASIC4.49□□□□□ -1.69
UBA52P62987 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC4.49□□□□□ -1.69
UBA52P62987 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.49□□□□□ -1.69
UBA52P62987 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.49□□□□□ -1.69
UBA52P62987 HSPE1P2-201ENST00000554777 306 ntBASIC4.49□□□□□ -1.69
UBA52P62987 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.49□□□□□ -1.69
UBA52P62987 H3F3BP2-201ENST00000583907 357 ntBASIC4.49□□□□□ -1.69
UBA52P62987 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.49□□□□□ -1.69
UBA52P62987 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.49□□□□□ -1.69
UBA52P62987 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.49□□□□□ -1.69
UBA52P62987 AC126915.2-201ENST00000610957 190 ntBASIC4.49□□□□□ -1.69
UBA52P62987 AL118522.2-201ENST00000616045 615 ntBASIC4.49□□□□□ -1.69
UBA52P62987 MIR8069-1-201ENST00000616627 86 ntBASIC4.49□□□□□ -1.69
UBA52P62987 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.49□□□□□ -1.69
UBA52P62987 MIR8069-2-201ENST00000621412 86 ntBASIC4.49□□□□□ -1.69
UBA52P62987 OR52B5P-202ENST00000641118 1110 ntBASIC4.49□□□□□ -1.69
UBA52P62987 AL162456.1-201ENST00000634535 2006 ntBASIC4.49□□□□□ -1.69
UBA52P62987 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.49□□□□□ -1.69
UBA52P62987 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
UBA52P62987 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
UBA52P62987 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
UBA52P62987 AP001273.1-201ENST00000624493 3152 ntBASIC4.49□□□□□ -1.69
UBA52P62987 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
UBA52P62987 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
UBA52P62987 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
UBA52P62987 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.48□□□□□ -1.69
UBA52P62987 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
UBA52P62987 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
UBA52P62987 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
UBA52P62987 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
UBA52P62987 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.48□□□□□ -1.69
UBA52P62987 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
UBA52P62987 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
UBA52P62987 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
UBA52P62987 RPL23P2-201ENST00000320371 421 ntBASIC4.48□□□□□ -1.69
UBA52P62987 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
UBA52P62987 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
UBA52P62987 MIR550A3-201ENST00000390735 95 ntBASIC4.48□□□□□ -1.69
UBA52P62987 Y_RNA.625-201ENST00000411256 107 ntBASIC4.48□□□□□ -1.69
UBA52P62987 RPL37P18-201ENST00000411602 243 ntBASIC4.48□□□□□ -1.69
UBA52P62987 AL390774.1-201ENST00000411924 246 ntBASIC4.48□□□□□ -1.69
UBA52P62987 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.48□□□□□ -1.69
UBA52P62987 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.48□□□□□ -1.69
UBA52P62987 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.48□□□□□ -1.69
UBA52P62987 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
UBA52P62987 RPS26P41-201ENST00000450370 284 ntBASIC4.48□□□□□ -1.69
UBA52P62987 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.48□□□□□ -1.69
UBA52P62987 AC126177.5-201ENST00000549599 178 ntBASIC4.48□□□□□ -1.69
UBA52P62987 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.48□□□□□ -1.69
UBA52P62987 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.48□□□□□ -1.69
UBA52P62987 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.48□□□□□ -1.69
UBA52P62987 RN7SL52P-201ENST00000584271 284 ntBASIC4.48□□□□□ -1.69
UBA52P62987 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.48□□□□□ -1.69
UBA52P62987 AC000068.2-201ENST00000608816 460 ntBASIC4.48□□□□□ -1.69
UBA52P62987 WBP1LP8-201ENST00000617401 327 ntBASIC4.48□□□□□ -1.69
UBA52P62987 MIR6839-201ENST00000620425 113 ntBASIC4.48□□□□□ -1.69
UBA52P62987 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
UBA52P62987 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.48□□□□□ -1.69
UBA52P62987 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
UBA52P62987 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
UBA52P62987 ZNF733P-202ENST00000444809 1573 ntBASIC4.48□□□□□ -1.69
UBA52P62987 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
UBA52P62987 AC139713.2-215ENST00000641428 5037 ntBASIC4.48□□□□□ -1.69
UBA52P62987 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.48□□□□□ -1.69
UBA52P62987 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
UBA52P62987 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.48□□□□□ -1.69
UBA52P62987 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBA52P62987 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBA52P62987 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBA52P62987 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBA52P62987 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBA52P62987 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
UBA52P62987 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBA52P62987 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBA52P62987 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
UBA52P62987 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBA52P62987 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
UBA52P62987 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
UBA52P62987 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms