Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.92□□□□□ -1.62
VSX2P58304 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
VSX2P58304 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VSX2P58304 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VSX2P58304 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.92□□□□□ -1.62
VSX2P58304 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.92□□□□□ -1.62
VSX2P58304 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VSX2P58304 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VSX2P58304 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
VSX2P58304 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
VSX2P58304 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.92□□□□□ -1.62
VSX2P58304 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.92□□□□□ -1.62
VSX2P58304 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.92□□□□□ -1.62
VSX2P58304 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.92□□□□□ -1.62
VSX2P58304 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.92□□□□□ -1.62
VSX2P58304 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VSX2P58304 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.92□□□□□ -1.62
VSX2P58304 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.92□□□□□ -1.62
VSX2P58304 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.92□□□□□ -1.62
VSX2P58304 AC092647.3-201ENST00000443044 633 ntBASIC4.92□□□□□ -1.62
VSX2P58304 OR11I1P-201ENST00000486033 954 ntBASIC4.92□□□□□ -1.62
VSX2P58304 AC004453.1-201ENST00000487895 408 ntBASIC4.92□□□□□ -1.62
VSX2P58304 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.92□□□□□ -1.62
VSX2P58304 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.92□□□□□ -1.62
VSX2P58304 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.92□□□□□ -1.62
VSX2P58304 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VSX2P58304 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.92□□□□□ -1.62
VSX2P58304 AC011447.4-201ENST00000587562 111 ntBASIC4.92□□□□□ -1.62
VSX2P58304 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.92□□□□□ -1.62
VSX2P58304 BNIP3P35-201ENST00000604530 490 ntBASIC4.92□□□□□ -1.62
VSX2P58304 MIR7155-201ENST00000615925 56 ntBASIC4.92□□□□□ -1.62
VSX2P58304 AP002799.1-201ENST00000623552 423 ntBASIC4.92□□□□□ -1.62
VSX2P58304 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.92□□□□□ -1.62
VSX2P58304 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.92□□□□□ -1.62
VSX2P58304 AC132825.8-201ENST00000640783 297 ntBASIC4.92□□□□□ -1.62
VSX2P58304 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VSX2P58304 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
VSX2P58304 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
VSX2P58304 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VSX2P58304 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.92□□□□□ -1.62
VSX2P58304 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.92□□□□□ -1.62
VSX2P58304 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VSX2P58304 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
VSX2P58304 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VSX2P58304 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VSX2P58304 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VSX2P58304 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
VSX2P58304 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VSX2P58304 HSPA8P18-201ENST00000439846 1928 ntBASIC4.91□□□□□ -1.62
VSX2P58304 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VSX2P58304 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VSX2P58304 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.91□□□□□ -1.62
VSX2P58304 Z95331.1-201ENST00000623075 23112 ntBASIC4.91□□□□□ -1.62
VSX2P58304 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VSX2P58304 SNURFL-201ENST00000309296 343 ntBASIC4.91□□□□□ -1.62
VSX2P58304 RNA5SP455-201ENST00000365190 119 ntBASIC4.91□□□□□ -1.62
VSX2P58304 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.91□□□□□ -1.62
VSX2P58304 SNORA48.4-201ENST00000391089 134 ntBASIC4.91□□□□□ -1.62
VSX2P58304 AL645927.1-201ENST00000396783 406 ntBASIC4.91□□□□□ -1.62
VSX2P58304 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.91□□□□□ -1.62
VSX2P58304 RN7SKP114-201ENST00000410327 279 ntBASIC4.91□□□□□ -1.62
VSX2P58304 AC002524.1-201ENST00000411687 547 ntBASIC4.91□□□□□ -1.62
VSX2P58304 AC013410.1-201ENST00000436223 1232 ntBASIC4.91□□□□□ -1.62
VSX2P58304 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.91□□□□□ -1.62
VSX2P58304 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.91□□□□□ -1.62
VSX2P58304 AC097484.1-201ENST00000471148 389 ntBASIC4.91□□□□□ -1.62
VSX2P58304 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.91□□□□□ -1.62
VSX2P58304 AC004980.4-201ENST00000513375 203 ntBASIC4.91□□□□□ -1.62
VSX2P58304 RN7SKP260-201ENST00000516907 149 ntBASIC4.91□□□□□ -1.62
VSX2P58304 RN7SKP147-201ENST00000517154 244 ntBASIC4.91□□□□□ -1.62
VSX2P58304 AC013701.1-201ENST00000522657 465 ntBASIC4.91□□□□□ -1.62
VSX2P58304 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.91□□□□□ -1.62
VSX2P58304 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.91□□□□□ -1.62
VSX2P58304 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.91□□□□□ -1.62
VSX2P58304 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.91□□□□□ -1.62
VSX2P58304 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.91□□□□□ -1.62
VSX2P58304 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.91□□□□□ -1.62
VSX2P58304 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.91□□□□□ -1.62
VSX2P58304 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VSX2P58304 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.91□□□□□ -1.62
VSX2P58304 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.91□□□□□ -1.62
VSX2P58304 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.91□□□□□ -1.62
VSX2P58304 AL589935.2-201ENST00000616471 1231 ntBASIC4.91□□□□□ -1.62
VSX2P58304 AC090510.2-201ENST00000617465 629 ntBASIC4.91□□□□□ -1.62
VSX2P58304 AC026367.3-201ENST00000619032 590 ntBASIC4.91□□□□□ -1.62
VSX2P58304 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.91□□□□□ -1.62
VSX2P58304 CASC19-222ENST00000641321 1173 ntBASIC4.91□□□□□ -1.62
VSX2P58304 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VSX2P58304 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VSX2P58304 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
VSX2P58304 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VSX2P58304 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.91□□□□□ -1.62
VSX2P58304 AC006210.2-201ENST00000367074 1545 ntBASIC4.91□□□□□ -1.62
VSX2P58304 SAMMSON-213ENST00000641336 1521 ntBASIC4.91□□□□□ -1.62
VSX2P58304 AL034549.2-201ENST00000618285 3373 ntBASIC4.91□□□□□ -1.62
VSX2P58304 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VSX2P58304 CASC19-281ENST00000642118 1554 ntBASIC4.91□□□□□ -1.62
VSX2P58304 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VSX2P58304 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
VSX2P58304 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms