Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC021074.2-201ENST00000468434 172 ntBASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 NPM1P27-201ENST00000502784 830 ntBASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 AC006070.1-201ENST00000508151 193 ntBASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 RNU6-150P-201ENST00000516237 95 ntBASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 IGLVVI-25-1-201ENST00000521893 249 ntBASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 AL121594.2-201ENST00000541658 472 ntBASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 AC011712.1-201ENST00000588959 234 ntBASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 AC087283.1-201ENST00000604029 1074 ntBASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 RN7SL760P-201ENST00000607344 270 ntBASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 RNU6-84P-201ENST00000607737 102 ntBASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 AL451049.1-201ENST00000608672 497 ntBASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 AC097381.3-201ENST00000608962 462 ntBASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 AL683826.1-201ENST00000624104 627 ntBASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGA11Q9Y5H2 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AL391380.1-201ENST00000439300 1432 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 EEF1A1P5-201ENST00000436459 1389 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 RN7SKP63-201ENST00000363187 301 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 CNN3P1-201ENST00000401596 935 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 RNA5SP118-201ENST00000410385 109 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 RN7SKP131-201ENST00000410698 301 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 RNU6-272P-201ENST00000411028 104 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AC244452.1-201ENST00000413798 141 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AL158073.1-201ENST00000426848 1104 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 SNX18P14-201ENST00000429308 574 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 HMGB3P12-201ENST00000438745 556 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AL451074.4-201ENST00000447545 470 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 RPL23AP20-201ENST00000447965 421 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AC079448.1-201ENST00000449377 373 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 COX6B1P4-201ENST00000519826 484 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AC136944.5-201ENST00000573021 151 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 TPMTP1-201ENST00000592307 737 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AC022432.1-201ENST00000595739 310 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 YWHAQP7-201ENST00000603536 658 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AC020910.2-201ENST00000603635 610 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AL157899.1-201ENST00000604110 936 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AL133338.2-201ENST00000604292 736 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AC104117.5-201ENST00000606195 547 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AC243773.3-201ENST00000613270 256 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 MIR6732-201ENST00000619365 60 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 243.8 ms