Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 AC046176.1-201ENST00000435260 1170 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 RPS11P7-201ENST00000442125 465 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 RN7SL174P-201ENST00000475578 289 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 RN7SL809P-201ENST00000482040 297 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 RN7SL547P-201ENST00000490793 290 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 RPS12P31-201ENST00000491419 398 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 RPS24P16-201ENST00000497294 392 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 AC138832.1-201ENST00000522871 556 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 HMGB1P40-201ENST00000525121 540 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 AC027369.5-201ENST00000533838 755 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 AP004607.2-201ENST00000533949 322 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 AC008147.3-201ENST00000548666 354 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 AC087888.1-201ENST00000550884 1254 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 SUGT1P3-202ENST00000604259 383 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 AC009027.1-201ENST00000604510 479 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 AC138965.3-201ENST00000623875 498 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 AC021106.3-201ENST00000623925 531 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 AC092159.4-201ENST00000624944 550 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 TMEM30CP-203ENST00000637814 1035 ntBASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.87□□□□□ -1.63
CHRNA9Q9UGM1 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 RNA5SP132-201ENST00000364725 118 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 VDAC2P1-201ENST00000399358 958 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 SNORA11.3-201ENST00000408471 128 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 NPM1P40-201ENST00000412758 733 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 NPM1P26-201ENST00000426339 738 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 NPM1P22-201ENST00000427761 952 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 AL121776.1-201ENST00000429337 372 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 TPTE2P1-204ENST00000435256 593 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 AL391987.1-201ENST00000441025 200 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 GAPDHP14-201ENST00000450472 937 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 RPL7P45-201ENST00000455851 743 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 RPL15P21-201ENST00000495592 567 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 ATG10-AS1-201ENST00000504846 648 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 EIF3KP3-201ENST00000514461 639 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 RFPL4AP5-201ENST00000514977 504 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 RNA5SP362-201ENST00000516048 118 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 OR10D4P-201ENST00000525892 951 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 AC040958.1-201ENST00000561102 201 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 AC009852.2-201ENST00000567898 485 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 AC012146.2-201ENST00000576545 416 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 WBP1LP8-201ENST00000617401 327 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 SNORA11.6-201ENST00000619030 128 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 AC091932.2-201ENST00000623014 291 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 AP002967.1-201ENST00000624203 539 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 AP003400.3-201ENST00000624904 346 ntBASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA9Q9UGM1 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CHRNA9Q9UGM1 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
CHRNA9Q9UGM1 AC008079.2-201ENST00000623543 20396 ntBASIC4.85□□□□□ -1.63
CHRNA9Q9UGM1 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CHRNA9Q9UGM1 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CHRNA9Q9UGM1 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CHRNA9Q9UGM1 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CHRNA9Q9UGM1 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms