Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SIX2Q9NPC8 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.41□□□□□ -1.54
SIX2Q9NPC8 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.41□□□□□ -1.54
SIX2Q9NPC8 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
SIX2Q9NPC8 AC092646.2-201ENST00000431242 2095 ntBASIC5.41□□□□□ -1.54
SIX2Q9NPC8 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SIX2Q9NPC8 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SIX2Q9NPC8 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 PEX12P1-201ENST00000400284 1048 ntBASIC5.4□□□□□ -1.54
SIX2Q9NPC8 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.4□□□□□ -1.54
SIX2Q9NPC8 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 SCAND3P1-201ENST00000439854 1060 ntBASIC5.4□□□□□ -1.54
SIX2Q9NPC8 CNOT7P2-201ENST00000441051 832 ntBASIC5.4□□□□□ -1.54
SIX2Q9NPC8 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 AL500527.1-201ENST00000448532 255 ntBASIC5.4□□□□□ -1.54
SIX2Q9NPC8 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 RN7SL799P-201ENST00000475891 298 ntBASIC5.4□□□□□ -1.54
SIX2Q9NPC8 OR2AO1P-201ENST00000476497 403 ntBASIC5.4□□□□□ -1.54
SIX2Q9NPC8 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 AC026688.1-201ENST00000520639 1168 ntBASIC5.4□□□□□ -1.54
SIX2Q9NPC8 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 GMCL1P2-201ENST00000605230 823 ntBASIC5.4□□□□□ -1.54
SIX2Q9NPC8 AC037198.3-201ENST00000616754 526 ntBASIC5.4□□□□□ -1.54
SIX2Q9NPC8 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 AC020923.1-201ENST00000624021 917 ntBASIC5.4□□□□□ -1.54
SIX2Q9NPC8 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.4□□□□□ -1.54
SIX2Q9NPC8 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SIX2Q9NPC8 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.4□□□□□ -1.55
SIX2Q9NPC8 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SIX2Q9NPC8 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.4□□□□□ -1.55
SIX2Q9NPC8 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
SIX2Q9NPC8 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
SIX2Q9NPC8 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SIX2Q9NPC8 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SIX2Q9NPC8 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 SNURFL-201ENST00000309296 343 ntBASIC5.39□□□□□ -1.55
SIX2Q9NPC8 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 AC017079.1-201ENST00000333650 415 ntBASIC5.39□□□□□ -1.55
SIX2Q9NPC8 SNORA70.10-201ENST00000384515 134 ntBASIC5.39□□□□□ -1.55
SIX2Q9NPC8 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 NPM1P48-201ENST00000436002 853 ntBASIC5.39□□□□□ -1.55
SIX2Q9NPC8 AC073052.1-201ENST00000440417 714 ntBASIC5.39□□□□□ -1.55
SIX2Q9NPC8 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 AL354714.3-201ENST00000447284 493 ntBASIC5.39□□□□□ -1.55
SIX2Q9NPC8 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 RN7SL172P-201ENST00000460535 303 ntBASIC5.39□□□□□ -1.55
SIX2Q9NPC8 AP002371.1-201ENST00000463604 433 ntBASIC5.39□□□□□ -1.55
SIX2Q9NPC8 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 SNRPCP2-201ENST00000504370 475 ntBASIC5.39□□□□□ -1.55
SIX2Q9NPC8 RPL7L1P4-201ENST00000513004 707 ntBASIC5.39□□□□□ -1.55
SIX2Q9NPC8 ENPP7P9-201ENST00000514456 627 ntBASIC5.39□□□□□ -1.55
SIX2Q9NPC8 RNA5SP43-201ENST00000516559 110 ntBASIC5.39□□□□□ -1.55
SIX2Q9NPC8 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 AC104687.2-201ENST00000604442 342 ntBASIC5.39□□□□□ -1.55
SIX2Q9NPC8 MIR6768-201ENST00000610734 72 ntBASIC5.39□□□□□ -1.55
SIX2Q9NPC8 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 AC018628.1-201ENST00000624147 3819 ntBASIC5.39□□□□□ -1.55
SIX2Q9NPC8 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIX2Q9NPC8 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SIX2Q9NPC8 AC007998.4-201ENST00000612496 2533 ntBASIC5.38□□□□□ -1.55
SIX2Q9NPC8 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.38□□□□□ -1.55
SIX2Q9NPC8 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.38□□□□□ -1.55
SIX2Q9NPC8 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIX2Q9NPC8 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms