Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
CNTNAP3Q9BZ76 RLIMP2-201ENST00000427891 1563 ntBASIC7.11□□□□□ -1.27
CNTNAP3Q9BZ76 AL136298.2-201ENST00000556497 1570 ntBASIC7.11□□□□□ -1.27
CNTNAP3Q9BZ76 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
CNTNAP3Q9BZ76 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CNTNAP3Q9BZ76 AC217777.1-201ENST00000570034 1471 ntBASIC7.11□□□□□ -1.27
CNTNAP3Q9BZ76 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CNTNAP3Q9BZ76 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 CASC19-205ENST00000641013 1411 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 AC087045.3-201ENST00000623046 2468 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 EEF1A1P42-201ENST00000613436 1331 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 DDX18P6-201ENST00000450119 1997 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 SLC17A2-202ENST00000360488 2270 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 Y_RNA.157-201ENST00000363638 102 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 Y_RNA.259-201ENST00000364619 101 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 Y_RNA.445-201ENST00000384168 102 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 RNA5SP185-201ENST00000390963 114 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 Y_RNA.598-201ENST00000410480 95 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 AC009302.1-201ENST00000417147 390 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 MTCO2P5-201ENST00000422621 426 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 FDPSP1-201ENST00000424976 1071 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 AL356583.2-201ENST00000426536 280 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 VN1R38P-201ENST00000450265 887 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 KCTD9P5-201ENST00000504141 1170 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 NPM1P21-201ENST00000513394 762 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 AC109635.6-201ENST00000525487 1113 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 MT1L-202ENST00000566367 78 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 RN7SL230P-201ENST00000580835 303 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 AC020914.6-201ENST00000594327 272 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 AL080274.1-201ENST00000605565 220 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 U1.22-201ENST00000605806 164 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 MIR8075-201ENST00000614354 80 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 DLEU1_2.1-201ENST00000617920 342 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 AC012360.3-201ENST00000610036 3449 ntBASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.1□□□□□ -1.27
CNTNAP3Q9BZ76 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 ELL2P4-201ENST00000446870 1376 ntBASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 DCAF13P3-201ENST00000561147 1334 ntBASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CNTNAP3Q9BZ76 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms