Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 RANP9-201ENST00000519957 271 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 AC091175.1-201ENST00000522168 572 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 COX6CP8-201ENST00000522620 226 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 AC005230.1-201ENST00000555418 285 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 AC099508.2-201ENST00000563098 510 ntTSL 3 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 AC092332.1-201ENST00000563684 829 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 AC139085.1-201ENST00000582716 182 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 AC106782.6-201ENST00000611264 512 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 LINC02391-201ENST00000615716 800 ntTSL 5 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 ALG13-230ENST00000623189 458 ntTSL 3 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 TEX41-279ENST00000629149 609 ntTSL 5 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
USB1Q9BQ65 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
USB1Q9BQ65 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USB1Q9BQ65 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
USB1Q9BQ65 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
USB1Q9BQ65 WDR44-203ENST00000371825 4029 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USB1Q9BQ65 AC107980.1-201ENST00000558671 3355 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
USB1Q9BQ65 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USB1Q9BQ65 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
USB1Q9BQ65 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 RTP3-201ENST00000296142 1321 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
USB1Q9BQ65 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
USB1Q9BQ65 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
USB1Q9BQ65 PSG9-205ENST00000443718 1421 ntTSL 2 BASIC7.27□□□□□ -1.24
USB1Q9BQ65 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
USB1Q9BQ65 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
USB1Q9BQ65 VPS35P1-201ENST00000563400 1518 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 AC005034.3-201ENST00000604845 1747 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
USB1Q9BQ65 TTC33-201ENST00000337702 2612 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
USB1Q9BQ65 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
USB1Q9BQ65 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
USB1Q9BQ65 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 RNA5SP71-201ENST00000362967 126 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 RNU4-59P-201ENST00000364447 116 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
USB1Q9BQ65 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
USB1Q9BQ65 AL590290.1-201ENST00000405336 380 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 MIR548K-201ENST00000408406 116 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 MTND4LP17-201ENST00000414607 293 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 AL034379.1-201ENST00000423216 253 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 NEFLP1-201ENST00000436364 984 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 RPS24P13-201ENST00000442520 397 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 H2AFZP6-201ENST00000444403 394 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 AL035666.1-201ENST00000446195 348 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 AL135929.1-201ENST00000449287 552 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 RPS24P6-201ENST00000452670 400 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
USB1Q9BQ65 RPS20P32-201ENST00000456044 356 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 Y_RNA.653-201ENST00000459091 95 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 RN7SL63P-201ENST00000468228 304 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 RN7SL864P-201ENST00000493457 285 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 TMEM251P1-201ENST00000503717 318 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 AC091885.1-201ENST00000506658 268 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 MTCYBP40-201ENST00000509390 1135 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 OR51A1P-201ENST00000511110 946 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 RNU6-864P-201ENST00000516256 108 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 RNU6-388P-201ENST00000517012 105 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 RNU6-389P-201ENST00000517048 105 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 RN7SKP283-201ENST00000517197 270 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 IGHVII-78-1-201ENST00000521105 269 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 IGKV2OR22-4-201ENST00000523309 367 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 PMS2P3-207ENST00000529061 717 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 RGS4-209ENST00000531057 544 ntTSL 4 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
USB1Q9BQ65 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 AC010653.1-201ENST00000571108 881 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 SNORD39.2-201ENST00000579995 76 ntBASIC7.27□□□□□ -1.25
USB1Q9BQ65 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC7.27□□□□□ -1.25
USB1Q9BQ65 SNRPCP20-201ENST00000588011 210 ntBASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms