Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RPL12P28-201ENST00000430852 489 ntBASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 HMGB3P24-201ENST00000433260 622 ntBASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AC006335.2-201ENST00000437993 330 ntBASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AC021106.1-201ENST00000509020 1058 ntBASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AC133963.2-201ENST00000513686 578 ntBASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 MRPS36P5-201ENST00000551909 298 ntBASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AC106734.1-201ENST00000568646 663 ntBASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AC015802.2-201ENST00000589690 189 ntBASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AC024884.1-201ENST00000620583 399 ntBASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 MTCO1P15-201ENST00000529569 1526 ntBASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 AC092681.1-201ENST00000297369 291 ntBASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 Z68694.1-201ENST00000413929 841 ntBASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 RIMKLBP2-201ENST00000424737 654 ntBASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 RPS27P5-201ENST00000444247 244 ntBASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 IGBP1P3-201ENST00000447449 1000 ntBASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 AC118758.1-202ENST00000454719 225 ntBASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 SNRPCP3-201ENST00000474888 476 ntBASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 AC022215.1-201ENST00000481770 362 ntBASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 AC116562.1-201ENST00000485355 781 ntBASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 AL359091.2-201ENST00000609303 556 ntBASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 AC245100.7-201ENST00000609678 442 ntBASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 AC063952.1-203ENST00000634410 658 ntBASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 AC003973.3-201ENST00000624863 2822 ntBASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 AL132656.3-201ENST00000606384 1595 ntBASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4AQ8WYN0 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms