Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 AC132825.1-201ENST00000463573 2247 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 AC008432.1-201ENST00000615912 1320 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 AC013488.1-201ENST00000526618 1838 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 AL159987.1-201ENST00000347911 293 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 RPL22P22-201ENST00000395439 379 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 ZNF602P-201ENST00000405929 924 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 U3.36-201ENST00000408418 213 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 SNORA79B-201ENST00000410557 148 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 MTCO1P43-201ENST00000431831 488 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 CETN4P-201ENST00000432407 469 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 AC092447.2-201ENST00000435487 669 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 ELOCP11-201ENST00000436690 332 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 FABP5P3-201ENST00000437960 408 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 ELOCP13-201ENST00000443934 329 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 ELOCP16-201ENST00000444494 332 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 RPL23AP60-201ENST00000450011 454 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 AC021146.7-201ENST00000509604 775 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 OR8K4P-201ENST00000534608 872 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 AC023825.1-201ENST00000566704 1030 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 AL606834.3-201ENST00000602615 496 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 AC098935.2-201ENST00000604222 466 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 AC009464.1-201ENST00000615731 469 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 CYCSP41-201ENST00000616920 296 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 AC011493.1-201ENST00000596753 1632 ntBASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SMC1BQ8NDV3 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 AL078595.2-201ENST00000605309 1780 ntBASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 RNVU1-6-201ENST00000364688 164 ntBASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 SNORA70.9-201ENST00000384370 135 ntBASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 RNU6-298P-201ENST00000390888 96 ntBASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 AL357752.1-201ENST00000412817 349 ntBASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 AL590139.1-201ENST00000416267 400 ntBASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 NENFP1-201ENST00000419476 466 ntBASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 ZNF736P7Y-201ENST00000425158 820 ntBASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 AC011753.3-201ENST00000443436 406 ntBASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 RPL21P47-201ENST00000483696 477 ntBASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 IGKV2D-10-201ENST00000520194 281 ntBASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 EEF1A1P37-201ENST00000522748 715 ntBASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms