Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SNORA70.3-201ENST00000365075 132 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AC068533.2-201ENST00000411872 306 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AL713922.1-201ENST00000416477 747 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AL121878.1-201ENST00000418638 859 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 FABP5P2-201ENST00000439042 408 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AC073476.1-201ENST00000452854 407 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 RPS26P11-201ENST00000463445 348 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 RPS26P6-201ENST00000475156 348 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 RN7SL655P-201ENST00000486087 298 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AP003080.1-202ENST00000526526 915 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 OR5AQ1P-201ENST00000527596 927 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AC093012.1-202ENST00000549403 582 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AL133457.1-201ENST00000564251 987 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AC004232.1-201ENST00000571388 208 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 MIR5095-201ENST00000578844 88 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AL020991.1-201ENST00000612314 373 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AC040896.1-201ENST00000613819 479 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AL445264.1-201ENST00000621719 171 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AC005753.1-201ENST00000623837 618 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 HSPD1P1-201ENST00000503199 1726 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AL391262.1-201ENST00000556558 1992 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 AL596244.1-201ENST00000567068 3779 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 RAD17P2-201ENST00000451754 1977 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 RNU6-1331P-201ENST00000363658 106 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 RN7SKP118-201ENST00000364331 330 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 RNU6-660P-201ENST00000364566 109 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 MIR99A-201ENST00000384906 81 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 CYCSP17-201ENST00000407870 315 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 NRBF2P2-201ENST00000413087 861 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 RPL18AP14-201ENST00000417685 526 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 GTF2IP23-201ENST00000423746 351 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 RFC5P1-201ENST00000454419 874 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 PMCHL2-203ENST00000457791 237 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 AC115223.1-201ENST00000466377 870 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 RN7SL849P-201ENST00000485236 295 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 RN7SL868P-201ENST00000485915 303 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 RN7SL561P-201ENST00000488553 281 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 RPL23AP80-201ENST00000495605 424 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 AC018710.1-201ENST00000506509 158 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms