Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RSPO4Q2I0M5 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.71□□□□□ -1.33
RSPO4Q2I0M5 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
RSPO4Q2I0M5 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 Y_RNA.72-201ENST00000362894 103 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 RNU6-767P-201ENST00000384132 107 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 RNU6-878P-201ENST00000384578 110 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 RNU6-1055P-201ENST00000391085 107 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AL590143.1-201ENST00000405071 138 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 RNU2-39P-201ENST00000410604 198 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 RPS26P38-201ENST00000414476 348 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 ZNF90P2-204ENST00000419323 1075 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AL353193.1-201ENST00000421444 268 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 SNRPGP6-201ENST00000451124 220 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 CECR9-201ENST00000453421 199 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AC068228.1-201ENST00000461723 211 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 MTND1P16-201ENST00000465177 898 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AC008629.2-201ENST00000503783 483 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AC114981.1-201ENST00000503897 678 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AC022447.3-201ENST00000506865 495 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AC108078.1-201ENST00000508073 725 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 NXPE2P1-201ENST00000543705 726 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 GTF2IP22-201ENST00000554443 182 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AC037471.2-201ENST00000564941 598 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 MIR3149-201ENST00000584629 83 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 BNIP3P26-201ENST00000600827 554 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 ACTR3BP1-201ENST00000605584 1247 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AL021368.3-201ENST00000607119 578 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AC022467.1-201ENST00000614738 749 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AC243756.2-201ENST00000618406 463 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AC007342.8-201ENST00000623278 678 ntBASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RSPO4Q2I0M5 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 NEPNP-201ENST00000404786 1371 ntBASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 Y_RNA.296-201ENST00000364930 108 ntBASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 SNORA4.3-201ENST00000365564 137 ntBASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 MIR559-201ENST00000385188 96 ntBASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 UBBP1-201ENST00000392399 473 ntBASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 AL035422.1-201ENST00000414193 397 ntBASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.7□□□□□ -1.34
RSPO4Q2I0M5 PDCL2P1-201ENST00000419302 352 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms