Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LTBQ06643 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.14□□□□□ -1.59
LTBQ06643 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LTBQ06643 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.14□□□□□ -1.59
LTBQ06643 AC009962.1-201ENST00000567327 3813 ntBASIC5.14□□□□□ -1.59
LTBQ06643 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LTBQ06643 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LTBQ06643 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LTBQ06643 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.14□□□□□ -1.59
LTBQ06643 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.13□□□□□ -1.59
LTBQ06643 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LTBQ06643 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
LTBQ06643 UGT2B24P-201ENST00000514441 1597 ntBASIC5.13□□□□□ -1.59
LTBQ06643 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
LTBQ06643 AC104964.3-201ENST00000606115 2860 ntBASIC5.13□□□□□ -1.59
LTBQ06643 AC068870.1-201ENST00000563737 2455 ntBASIC5.13□□□□□ -1.59
LTBQ06643 GTF2IP4-201ENST00000453092 2054 ntBASIC5.13□□□□□ -1.59
LTBQ06643 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LTBQ06643 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LTBQ06643 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LTBQ06643 MIR375-201ENST00000362103 64 ntBASIC5.13□□□□□ -1.59
LTBQ06643 RN7SKP103-201ENST00000363848 320 ntBASIC5.13□□□□□ -1.59
LTBQ06643 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LTBQ06643 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.13□□□□□ -1.59
LTBQ06643 RPS27AP6-201ENST00000427962 448 ntBASIC5.13□□□□□ -1.59
LTBQ06643 SETP8-201ENST00000435341 628 ntBASIC5.13□□□□□ -1.59
LTBQ06643 AC002504.1-201ENST00000438281 691 ntBASIC5.13□□□□□ -1.59
LTBQ06643 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.13□□□□□ -1.59
LTBQ06643 TXNP2-201ENST00000443918 295 ntBASIC5.13□□□□□ -1.59
LTBQ06643 MTND1P33-201ENST00000446251 917 ntBASIC5.13□□□□□ -1.59
LTBQ06643 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LTBQ06643 MEMO1P4-201ENST00000453590 386 ntBASIC5.13□□□□□ -1.59
LTBQ06643 CBX1P2-201ENST00000453841 458 ntBASIC5.13□□□□□ -1.59
LTBQ06643 snoU109.3-201ENST00000459477 145 ntBASIC5.13□□□□□ -1.59
LTBQ06643 AC108161.1-201ENST00000461060 402 ntBASIC5.13□□□□□ -1.59
LTBQ06643 OR7E157P-201ENST00000494376 911 ntBASIC5.13□□□□□ -1.59
LTBQ06643 RPS26P24-201ENST00000497656 331 ntBASIC5.13□□□□□ -1.59
LTBQ06643 AC109481.1-201ENST00000509173 282 ntBASIC5.13□□□□□ -1.59
LTBQ06643 AC108157.1-201ENST00000510511 539 ntBASIC5.13□□□□□ -1.59
LTBQ06643 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.13□□□□□ -1.59
LTBQ06643 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.13□□□□□ -1.59
LTBQ06643 RNA5SP92-201ENST00000516437 110 ntBASIC5.13□□□□□ -1.59
LTBQ06643 IGLV3-24-201ENST00000517477 197 ntBASIC5.13□□□□□ -1.59
LTBQ06643 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LTBQ06643 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.13□□□□□ -1.59
LTBQ06643 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.13□□□□□ -1.59
LTBQ06643 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.13□□□□□ -1.59
LTBQ06643 MORF4L1P3-201ENST00000525966 950 ntBASIC5.13□□□□□ -1.59
LTBQ06643 OSBPL9P3-201ENST00000534523 595 ntBASIC5.13□□□□□ -1.59
LTBQ06643 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.13□□□□□ -1.59
LTBQ06643 DPPA2P4-201ENST00000563717 878 ntBASIC5.13□□□□□ -1.59
LTBQ06643 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.13□□□□□ -1.59
LTBQ06643 MIR4505-201ENST00000582238 73 ntBASIC5.13□□□□□ -1.59
LTBQ06643 MIR4260-201ENST00000583107 67 ntBASIC5.13□□□□□ -1.59
LTBQ06643 ELOCP28-201ENST00000590044 317 ntBASIC5.13□□□□□ -1.59
LTBQ06643 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
LTBQ06643 MTCO2P2-201ENST00000591258 225 ntBASIC5.13□□□□□ -1.59
LTBQ06643 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.13□□□□□ -1.59
LTBQ06643 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LTBQ06643 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LTBQ06643 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.13□□□□□ -1.59
LTBQ06643 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.13□□□□□ -1.59
LTBQ06643 AC063977.5-201ENST00000601044 974 ntBASIC5.13□□□□□ -1.59
LTBQ06643 AC096586.2-201ENST00000610260 441 ntBASIC5.13□□□□□ -1.59
LTBQ06643 MIR6820-201ENST00000611508 62 ntBASIC5.13□□□□□ -1.59
LTBQ06643 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LTBQ06643 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.13□□□□□ -1.59
LTBQ06643 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.13□□□□□ -1.59
LTBQ06643 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.13□□□□□ -1.59
LTBQ06643 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LTBQ06643 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LTBQ06643 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LTBQ06643 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LTBQ06643 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.13□□□□□ -1.59
LTBQ06643 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.13□□□□□ -1.59
LTBQ06643 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LTBQ06643 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LTBQ06643 AL022311.1-201ENST00000623726 19416 ntBASIC5.13□□□□□ -1.59
LTBQ06643 GVINP1-202ENST00000531871 7271 ntBASIC5.13□□□□□ -1.59
LTBQ06643 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.13□□□□□ -1.59
LTBQ06643 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LTBQ06643 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.13□□□□□ -1.59
LTBQ06643 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LTBQ06643 AC093671.1-201ENST00000624981 2929 ntBASIC5.13□□□□□ -1.59
LTBQ06643 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
LTBQ06643 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LTBQ06643 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LTBQ06643 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LTBQ06643 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
LTBQ06643 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LTBQ06643 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
LTBQ06643 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LTBQ06643 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LTBQ06643 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LTBQ06643 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LTBQ06643 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
LTBQ06643 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.12□□□□□ -1.59
LTBQ06643 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
LTBQ06643 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LTBQ06643 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms