Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TTC39DP-201ENST00000416781 1688 ntBASIC4.48□□□□□ -1.69
HIST1H3AP68431 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HIST1H3AP68431 AC021242.1-201ENST00000507315 2035 ntBASIC4.48□□□□□ -1.69
HIST1H3AP68431 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H3AP68431 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H3AP68431 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H3AP68431 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HIST1H3AP68431 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.48□□□□□ -1.69
HIST1H3AP68431 SNORA17.1-201ENST00000362945 126 ntBASIC4.48□□□□□ -1.69
HIST1H3AP68431 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H3AP68431 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.48□□□□□ -1.69
HIST1H3AP68431 NPM1P33-201ENST00000438918 872 ntBASIC4.48□□□□□ -1.69
HIST1H3AP68431 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.48□□□□□ -1.69
HIST1H3AP68431 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H3AP68431 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.48□□□□□ -1.69
HIST1H3AP68431 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H3AP68431 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.48□□□□□ -1.69
HIST1H3AP68431 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H3AP68431 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.48□□□□□ -1.69
HIST1H3AP68431 MIR3176-201ENST00000582210 90 ntBASIC4.48□□□□□ -1.69
HIST1H3AP68431 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.48□□□□□ -1.69
HIST1H3AP68431 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.48□□□□□ -1.69
HIST1H3AP68431 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.48□□□□□ -1.69
HIST1H3AP68431 AC074140.1-201ENST00000621617 208 ntBASIC4.48□□□□□ -1.69
HIST1H3AP68431 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.48□□□□□ -1.69
HIST1H3AP68431 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.48□□□□□ -1.69
HIST1H3AP68431 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H3AP68431 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
HIST1H3AP68431 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H3AP68431 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H3AP68431 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H3AP68431 AL731566.1-201ENST00000620490 1937 ntBASIC4.48□□□□□ -1.69
HIST1H3AP68431 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H3AP68431 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H3AP68431 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H3AP68431 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.48□□□□□ -1.69
HIST1H3AP68431 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.48□□□□□ -1.69
HIST1H3AP68431 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
HIST1H3AP68431 LINC01355-201ENST00000566551 5444 ntBASIC4.47□□□□□ -1.69
HIST1H3AP68431 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HIST1H3AP68431 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HIST1H3AP68431 AC007996.1-201ENST00000620414 2821 ntBASIC4.47□□□□□ -1.69
HIST1H3AP68431 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 AC011493.1-201ENST00000596753 1632 ntBASIC4.47□□□□□ -1.69
HIST1H3AP68431 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HIST1H3AP68431 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 RN7SKP113-201ENST00000363891 295 ntBASIC4.47□□□□□ -1.69
HIST1H3AP68431 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HIST1H3AP68431 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 SNORA2.3-201ENST00000383920 135 ntBASIC4.47□□□□□ -1.69
HIST1H3AP68431 DUTP5-201ENST00000406790 469 ntBASIC4.47□□□□□ -1.69
HIST1H3AP68431 RPL35AP24-201ENST00000413846 330 ntBASIC4.47□□□□□ -1.69
HIST1H3AP68431 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.47□□□□□ -1.69
HIST1H3AP68431 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 KNOP1P3-201ENST00000446933 426 ntBASIC4.47□□□□□ -1.69
HIST1H3AP68431 AC004980.3-201ENST00000447046 365 ntBASIC4.47□□□□□ -1.69
HIST1H3AP68431 RNU7-157P-201ENST00000459600 66 ntBASIC4.47□□□□□ -1.69
HIST1H3AP68431 NPM1P29-201ENST00000483112 803 ntBASIC4.47□□□□□ -1.69
HIST1H3AP68431 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 AC073073.1-201ENST00000493920 463 ntBASIC4.47□□□□□ -1.69
HIST1H3AP68431 ATP5LP3-201ENST00000514223 304 ntBASIC4.47□□□□□ -1.69
HIST1H3AP68431 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 NDUFB4P11-201ENST00000560510 395 ntBASIC4.47□□□□□ -1.69
HIST1H3AP68431 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 AL512329.2-201ENST00000607350 548 ntBASIC4.47□□□□□ -1.69
HIST1H3AP68431 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HIST1H3AP68431 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HIST1H3AP68431 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HIST1H3AP68431 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HIST1H3AP68431 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
HIST1H3AP68431 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
HIST1H3AP68431 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
HIST1H3AP68431 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
HIST1H3AP68431 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HIST1H3AP68431 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H3AP68431 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H3AP68431 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H3AP68431 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H3AP68431 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H3AP68431 RNU1-43P-201ENST00000365052 165 ntBASIC4.46□□□□□ -1.7
HIST1H3AP68431 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H3AP68431 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H3AP68431 MIR1286-201ENST00000408112 78 ntBASIC4.46□□□□□ -1.7
HIST1H3AP68431 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.46□□□□□ -1.7
HIST1H3AP68431 AC211486.3-201ENST00000412694 621 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms