Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 DEFB109F-201ENST00000491870 277 ntBASIC4.56□□□□□ -1.68
VBP1P61758 NENFP3-201ENST00000503735 313 ntBASIC4.56□□□□□ -1.68
VBP1P61758 VWA8P1-201ENST00000510889 176 ntBASIC4.56□□□□□ -1.68
VBP1P61758 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.56□□□□□ -1.68
VBP1P61758 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.56□□□□□ -1.68
VBP1P61758 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VBP1P61758 CYCSP38-201ENST00000559840 322 ntBASIC4.56□□□□□ -1.68
VBP1P61758 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.56□□□□□ -1.68
VBP1P61758 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
VBP1P61758 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VBP1P61758 AC091304.5-201ENST00000568969 158 ntBASIC4.56□□□□□ -1.68
VBP1P61758 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VBP1P61758 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.56□□□□□ -1.68
VBP1P61758 AC005252.1-201ENST00000604518 1063 ntBASIC4.56□□□□□ -1.68
VBP1P61758 AL135786.2-201ENST00000608422 615 ntBASIC4.56□□□□□ -1.68
VBP1P61758 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VBP1P61758 AC004948.1-201ENST00000609858 672 ntBASIC4.56□□□□□ -1.68
VBP1P61758 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.56□□□□□ -1.68
VBP1P61758 MIR7848-201ENST00000617402 101 ntBASIC4.56□□□□□ -1.68
VBP1P61758 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.56□□□□□ -1.68
VBP1P61758 AC009237.17-201ENST00000618111 748 ntBASIC4.56□□□□□ -1.68
VBP1P61758 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC4.56□□□□□ -1.68
VBP1P61758 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VBP1P61758 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VBP1P61758 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
VBP1P61758 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VBP1P61758 AC007382.1-201ENST00000624376 2618 ntBASIC4.56□□□□□ -1.68
VBP1P61758 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.56□□□□□ -1.68
VBP1P61758 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VBP1P61758 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VBP1P61758 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.56□□□□□ -1.68
VBP1P61758 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.55□□□□□ -1.68
VBP1P61758 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
VBP1P61758 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.55□□□□□ -1.68
VBP1P61758 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.55□□□□□ -1.68
VBP1P61758 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
VBP1P61758 SSXP3-201ENST00000442971 1300 ntBASIC4.55□□□□□ -1.68
VBP1P61758 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.55□□□□□ -1.68
VBP1P61758 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VBP1P61758 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.55□□□□□ -1.68
VBP1P61758 Z73965.1-201ENST00000623412 2297 ntBASIC4.55□□□□□ -1.68
VBP1P61758 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VBP1P61758 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.55□□□□□ -1.68
VBP1P61758 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VBP1P61758 AL133260.1-201ENST00000405720 405 ntBASIC4.55□□□□□ -1.68
VBP1P61758 AL512422.1-201ENST00000407033 553 ntBASIC4.55□□□□□ -1.68
VBP1P61758 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.55□□□□□ -1.68
VBP1P61758 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.55□□□□□ -1.68
VBP1P61758 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VBP1P61758 BX323845.3-201ENST00000428215 527 ntBASIC4.55□□□□□ -1.68
VBP1P61758 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
VBP1P61758 NDUFS5P5-201ENST00000437256 321 ntBASIC4.55□□□□□ -1.68
VBP1P61758 RPEP4-201ENST00000437636 602 ntBASIC4.55□□□□□ -1.68
VBP1P61758 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.55□□□□□ -1.68
VBP1P61758 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.55□□□□□ -1.68
VBP1P61758 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.55□□□□□ -1.68
VBP1P61758 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.55□□□□□ -1.68
VBP1P61758 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VBP1P61758 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VBP1P61758 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
VBP1P61758 RPEP1-201ENST00000504507 658 ntBASIC4.55□□□□□ -1.68
VBP1P61758 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.55□□□□□ -1.68
VBP1P61758 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.55□□□□□ -1.68
VBP1P61758 RNA5SP340-201ENST00000517132 107 ntBASIC4.55□□□□□ -1.68
VBP1P61758 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.55□□□□□ -1.68
VBP1P61758 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.55□□□□□ -1.68
VBP1P61758 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC4.55□□□□□ -1.68
VBP1P61758 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.55□□□□□ -1.68
VBP1P61758 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.55□□□□□ -1.68
VBP1P61758 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.55□□□□□ -1.68
VBP1P61758 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC4.55□□□□□ -1.68
VBP1P61758 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.55□□□□□ -1.68
VBP1P61758 MRPS21P7-201ENST00000566937 238 ntBASIC4.55□□□□□ -1.68
VBP1P61758 AC005341.1-201ENST00000571086 708 ntBASIC4.55□□□□□ -1.68
VBP1P61758 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.55□□□□□ -1.68
VBP1P61758 SNORD39.2-201ENST00000579995 76 ntBASIC4.55□□□□□ -1.68
VBP1P61758 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
VBP1P61758 WBP1LP12-201ENST00000604449 331 ntBASIC4.55□□□□□ -1.68
VBP1P61758 AC092266.1-201ENST00000610958 165 ntBASIC4.55□□□□□ -1.68
VBP1P61758 AC067852.7-201ENST00000623270 535 ntBASIC4.55□□□□□ -1.68
VBP1P61758 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
VBP1P61758 AC008691.1-209ENST00000642094 814 ntBASIC4.55□□□□□ -1.68
VBP1P61758 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VBP1P61758 AC027290.2-201ENST00000623210 18662 ntBASIC4.55□□□□□ -1.68
VBP1P61758 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
VBP1P61758 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VBP1P61758 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VBP1P61758 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VBP1P61758 AL451142.2-201ENST00000429076 2090 ntBASIC4.55□□□□□ -1.68
VBP1P61758 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VBP1P61758 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.55□□□□□ -1.68
VBP1P61758 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
VBP1P61758 AC092435.4-201ENST00000623012 4159 ntBASIC4.54□□□□□ -1.68
VBP1P61758 MTND4P26-201ENST00000415971 1359 ntBASIC4.54□□□□□ -1.68
VBP1P61758 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.54□□□□□ -1.68
VBP1P61758 CR383656.5-201ENST00000547616 1340 ntBASIC4.54□□□□□ -1.68
VBP1P61758 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VBP1P61758 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
VBP1P61758 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VBP1P61758 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms