Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AL158827.1-201ENST00000416300 391 ntBASIC5.69□□□□□ -1.5
HOXC13P31276 OR5M12P-201ENST00000423388 929 ntBASIC5.69□□□□□ -1.5
HOXC13P31276 BX276092.6-201ENST00000430476 250 ntBASIC5.69□□□□□ -1.5
HOXC13P31276 CYCSP11-201ENST00000436426 315 ntBASIC5.69□□□□□ -1.5
HOXC13P31276 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXC13P31276 CASP3P1-201ENST00000446037 609 ntBASIC5.69□□□□□ -1.5
HOXC13P31276 AL645937.3-201ENST00000453647 936 ntBASIC5.69□□□□□ -1.5
HOXC13P31276 BX276092.8-201ENST00000455722 250 ntBASIC5.69□□□□□ -1.5
HOXC13P31276 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXC13P31276 LARP7P4-201ENST00000481075 878 ntBASIC5.69□□□□□ -1.5
HOXC13P31276 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC13P31276 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXC13P31276 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXC13P31276 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXC13P31276 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXC13P31276 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXC13P31276 AC008147.3-201ENST00000548666 354 ntBASIC5.69□□□□□ -1.5
HOXC13P31276 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC13P31276 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXC13P31276 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXC13P31276 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HOXC13P31276 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.69□□□□□ -1.5
HOXC13P31276 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXC13P31276 AC022387.2-201ENST00000604050 448 ntBASIC5.69□□□□□ -1.5
HOXC13P31276 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXC13P31276 AL139124.1-201ENST00000609123 421 ntBASIC5.69□□□□□ -1.5
HOXC13P31276 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXC13P31276 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXC13P31276 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
HOXC13P31276 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXC13P31276 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXC13P31276 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC13P31276 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC13P31276 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC13P31276 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC13P31276 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HOXC13P31276 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
HOXC13P31276 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC13P31276 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC13P31276 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.68□□□□□ -1.5
HOXC13P31276 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HOXC13P31276 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HOXC13P31276 RNU6-225P-201ENST00000384613 103 ntBASIC5.68□□□□□ -1.5
HOXC13P31276 RN7SKP213-201ENST00000410746 298 ntBASIC5.68□□□□□ -1.5
HOXC13P31276 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC13P31276 RPL7P56-201ENST00000429441 717 ntBASIC5.68□□□□□ -1.5
HOXC13P31276 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC13P31276 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC13P31276 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC13P31276 ELOCP3-201ENST00000439303 348 ntBASIC5.68□□□□□ -1.5
HOXC13P31276 ARL5AP3-201ENST00000439327 386 ntBASIC5.68□□□□□ -1.5
HOXC13P31276 IGBP1P3-201ENST00000447449 1000 ntBASIC5.68□□□□□ -1.5
HOXC13P31276 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC13P31276 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.68□□□□□ -1.5
HOXC13P31276 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC13P31276 AC091912.1-201ENST00000511351 248 ntBASIC5.68□□□□□ -1.5
HOXC13P31276 CDH12P4-201ENST00000517835 295 ntBASIC5.68□□□□□ -1.5
HOXC13P31276 CDH12P3-201ENST00000517935 295 ntBASIC5.68□□□□□ -1.5
HOXC13P31276 IGHV3-63-201ENST00000518422 341 ntBASIC5.68□□□□□ -1.5
HOXC13P31276 CDH12P1-201ENST00000518435 295 ntBASIC5.68□□□□□ -1.5
HOXC13P31276 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC13P31276 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HOXC13P31276 AL049779.2-201ENST00000553847 315 ntBASIC5.68□□□□□ -1.5
HOXC13P31276 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
HOXC13P31276 RBM22P1-201ENST00000578589 1214 ntBASIC5.68□□□□□ -1.5
HOXC13P31276 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC13P31276 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC13P31276 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC13P31276 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC13P31276 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC13P31276 AC126915.2-201ENST00000610957 190 ntBASIC5.68□□□□□ -1.5
HOXC13P31276 AP001784.1-201ENST00000624107 428 ntBASIC5.68□□□□□ -1.5
HOXC13P31276 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HOXC13P31276 AC140134.1-201ENST00000511830 3544 ntBASIC5.68□□□□□ -1.5
HOXC13P31276 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC13P31276 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC13P31276 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC13P31276 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HOXC13P31276 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC13P31276 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC13P31276 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC13P31276 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HOXC13P31276 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXC13P31276 AC011493.1-201ENST00000596753 1632 ntBASIC5.67□□□□□ -1.5
HOXC13P31276 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC13P31276 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HOXC13P31276 AC131971.1-201ENST00000332881 1482 ntBASIC5.67□□□□□ -1.5
HOXC13P31276 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXC13P31276 RNU6-670P-201ENST00000364312 104 ntBASIC5.67□□□□□ -1.5
HOXC13P31276 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC13P31276 AL589647.1-201ENST00000402485 466 ntBASIC5.67□□□□□ -1.5
HOXC13P31276 DHFRP5-201ENST00000406944 564 ntBASIC5.67□□□□□ -1.5
HOXC13P31276 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC13P31276 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.67□□□□□ -1.5
HOXC13P31276 AC093716.1-201ENST00000435923 377 ntBASIC5.67□□□□□ -1.5
HOXC13P31276 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC13P31276 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC13P31276 CALM1P2-201ENST00000452941 448 ntBASIC5.67□□□□□ -1.5
HOXC13P31276 CLIC4P1-201ENST00000453177 535 ntBASIC5.67□□□□□ -1.5
HOXC13P31276 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms