Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC8.61□□□□□ -1.03
PTPREP23469 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC8.61□□□□□ -1.03
PTPREP23469 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC8.61□□□□□ -1.03
PTPREP23469 AC113361.1-201ENST00000606683 543 ntBASIC8.61□□□□□ -1.03
PTPREP23469 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC8.61□□□□□ -1.03
PTPREP23469 AC084781.2-201ENST00000615568 161 ntBASIC8.61□□□□□ -1.03
PTPREP23469 AL138693.1-201ENST00000622219 129 ntBASIC8.61□□□□□ -1.03
PTPREP23469 AL356585.4-201ENST00000623078 1229 ntBASIC8.61□□□□□ -1.03
PTPREP23469 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC8.61□□□□□ -1.03
PTPREP23469 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
PTPREP23469 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTPREP23469 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
PTPREP23469 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTPREP23469 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC8.61□□□□□ -1.03
PTPREP23469 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTPREP23469 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC8.61□□□□□ -1.03
PTPREP23469 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PTPREP23469 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC8.6□□□□□ -1.03
PTPREP23469 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
PTPREP23469 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
PTPREP23469 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
PTPREP23469 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC8.6□□□□□ -1.03
PTPREP23469 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PTPREP23469 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PTPREP23469 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
PTPREP23469 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PTPREP23469 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC8.6□□□□□ -1.03
PTPREP23469 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PTPREP23469 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
PTPREP23469 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
PTPREP23469 RFX4-202ENST00000357881 2565 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PTPREP23469 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PTPREP23469 Y_RNA.381-201ENST00000365666 102 ntBASIC8.6□□□□□ -1.03
PTPREP23469 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC8.6□□□□□ -1.03
PTPREP23469 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
PTPREP23469 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
PTPREP23469 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
PTPREP23469 RNU6-1026P-201ENST00000384465 108 ntBASIC8.6□□□□□ -1.03
PTPREP23469 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
PTPREP23469 AL161909.1-201ENST00000397390 712 ntBASIC8.6□□□□□ -1.03
PTPREP23469 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC8.6□□□□□ -1.03
PTPREP23469 RPS26P13-201ENST00000419030 330 ntBASIC8.6□□□□□ -1.03
PTPREP23469 ELOCP4-201ENST00000420090 333 ntBASIC8.6□□□□□ -1.03
PTPREP23469 PMCHL1-202ENST00000423102 261 ntBASIC8.6□□□□□ -1.03
PTPREP23469 AL513175.1-201ENST00000431492 780 ntBASIC8.6□□□□□ -1.03
PTPREP23469 RPL36AP53-201ENST00000432891 316 ntBASIC8.6□□□□□ -1.03
PTPREP23469 PMS2P9-201ENST00000441237 515 ntBASIC8.6□□□□□ -1.03
PTPREP23469 LIN28AP2-201ENST00000445283 458 ntBASIC8.6□□□□□ -1.03
PTPREP23469 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC8.6□□□□□ -1.03
PTPREP23469 PMS2P11-201ENST00000451831 574 ntBASIC8.6□□□□□ -1.03
PTPREP23469 MRPS17P3-201ENST00000465453 385 ntBASIC8.6□□□□□ -1.03
PTPREP23469 RN7SL751P-201ENST00000473281 284 ntBASIC8.6□□□□□ -1.03
PTPREP23469 RN7SL153P-201ENST00000486501 292 ntBASIC8.6□□□□□ -1.03
PTPREP23469 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC8.6□□□□□ -1.03
PTPREP23469 AC105417.1-201ENST00000514691 285 ntBASIC8.6□□□□□ -1.03
PTPREP23469 RNU6-835P-201ENST00000516974 104 ntBASIC8.6□□□□□ -1.03
PTPREP23469 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC8.6□□□□□ -1.03
PTPREP23469 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC8.6□□□□□ -1.03
PTPREP23469 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC8.6□□□□□ -1.03
PTPREP23469 AL161670.1-201ENST00000554348 137 ntBASIC8.6□□□□□ -1.03
PTPREP23469 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC8.6□□□□□ -1.03
PTPREP23469 AL109628.1-201ENST00000556877 366 ntBASIC8.6□□□□□ -1.03
PTPREP23469 MT1B-202ENST00000562399 351 ntTSL 3 BASIC8.6□□□□□ -1.03
PTPREP23469 AC010327.2-201ENST00000587647 488 ntBASIC8.6□□□□□ -1.03
PTPREP23469 BNIP3P4-201ENST00000604946 565 ntBASIC8.6□□□□□ -1.03
PTPREP23469 U47924.1-201ENST00000606539 434 ntBASIC8.6□□□□□ -1.03
PTPREP23469 AC006924.1-201ENST00000610750 559 ntBASIC8.6□□□□□ -1.03
PTPREP23469 AC093913.1-201ENST00000614178 329 ntBASIC8.6□□□□□ -1.03
PTPREP23469 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC8.6□□□□□ -1.03
PTPREP23469 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC8.6□□□□□ -1.03
PTPREP23469 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC8.6□□□□□ -1.03
PTPREP23469 AC073488.2-201ENST00000631903 751 ntBASIC8.6□□□□□ -1.03
PTPREP23469 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC8.6□□□□□ -1.03
PTPREP23469 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PTPREP23469 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PTPREP23469 OR4G1P-202ENST00000641173 1788 ntBASIC8.6□□□□□ -1.03
PTPREP23469 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
PTPREP23469 CD86-209ENST00000493101 1572 ntTSL 2 BASIC8.6□□□□□ -1.03
PTPREP23469 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
PTPREP23469 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC8.6□□□□□ -1.03
PTPREP23469 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PTPREP23469 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC8.6□□□□□ -1.03
PTPREP23469 AC006058.1-201ENST00000568686 5067 ntBASIC8.59□□□□□ -1.03
PTPREP23469 XIST-206ENST00000434839 2865 ntTSL 5 BASIC8.59□□□□□ -1.03
PTPREP23469 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PTPREP23469 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PTPREP23469 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PTPREP23469 AC117409.1-201ENST00000470499 1310 ntBASIC8.59□□□□□ -1.03
PTPREP23469 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC8.59□□□□□ -1.03
PTPREP23469 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PTPREP23469 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.59□□□□□ -1.03
PTPREP23469 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PTPREP23469 AL592429.1-201ENST00000403909 1473 ntBASIC8.59□□□□□ -1.03
PTPREP23469 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PTPREP23469 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
PTPREP23469 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PTPREP23469 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PTPREP23469 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC8.59□□□□□ -1.03
PTPREP23469 SAMMSON-222ENST00000641901 2727 ntBASIC8.59□□□□□ -1.03
PTPREP23469 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms