Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTLA4P16410 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTLA4P16410 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTLA4P16410 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTLA4P16410 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
CTLA4P16410 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTLA4P16410 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTLA4P16410 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTLA4P16410 SNORA73.1-201ENST00000363107 205 ntBASIC4.44□□□□□ -1.7
CTLA4P16410 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CTLA4P16410 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTLA4P16410 AC079355.1-201ENST00000421770 223 ntBASIC4.44□□□□□ -1.7
CTLA4P16410 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.44□□□□□ -1.7
CTLA4P16410 NANOGP4-201ENST00000427230 913 ntBASIC4.44□□□□□ -1.7
CTLA4P16410 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.44□□□□□ -1.7
CTLA4P16410 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.44□□□□□ -1.7
CTLA4P16410 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.44□□□□□ -1.7
CTLA4P16410 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTLA4P16410 KNOP1P3-201ENST00000446933 426 ntBASIC4.44□□□□□ -1.7
CTLA4P16410 AL354714.3-201ENST00000447284 493 ntBASIC4.44□□□□□ -1.7
CTLA4P16410 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.44□□□□□ -1.7
CTLA4P16410 TCEA1P1-201ENST00000449716 880 ntBASIC4.44□□□□□ -1.7
CTLA4P16410 AL606490.1-201ENST00000452266 765 ntBASIC4.44□□□□□ -1.7
CTLA4P16410 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.44□□□□□ -1.7
CTLA4P16410 AC091544.1-201ENST00000484702 348 ntBASIC4.44□□□□□ -1.7
CTLA4P16410 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.44□□□□□ -1.7
CTLA4P16410 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.44□□□□□ -1.7
CTLA4P16410 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
CTLA4P16410 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.44□□□□□ -1.7
CTLA4P16410 HNRNPRP2-201ENST00000528421 743 ntBASIC4.44□□□□□ -1.7
CTLA4P16410 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.44□□□□□ -1.7
CTLA4P16410 AC005868.1-201ENST00000536421 331 ntBASIC4.44□□□□□ -1.7
CTLA4P16410 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.44□□□□□ -1.7
CTLA4P16410 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.44□□□□□ -1.7
CTLA4P16410 AC105254.2-201ENST00000603636 436 ntBASIC4.44□□□□□ -1.7
CTLA4P16410 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.44□□□□□ -1.7
CTLA4P16410 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CTLA4P16410 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CTLA4P16410 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CTLA4P16410 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTLA4P16410 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTLA4P16410 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTLA4P16410 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTLA4P16410 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CTLA4P16410 AL022393.1-201ENST00000625142 1677 ntBASIC4.44□□□□□ -1.7
CTLA4P16410 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CTLA4P16410 TET1P1-201ENST00000426627 2301 ntBASIC4.44□□□□□ -1.7
CTLA4P16410 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CTLA4P16410 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CTLA4P16410 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CTLA4P16410 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CTLA4P16410 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTLA4P16410 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTLA4P16410 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
CTLA4P16410 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.43□□□□□ -1.7
CTLA4P16410 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTLA4P16410 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CTLA4P16410 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTLA4P16410 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CTLA4P16410 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CTLA4P16410 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTLA4P16410 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.43□□□□□ -1.7
CTLA4P16410 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.43□□□□□ -1.7
CTLA4P16410 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.43□□□□□ -1.7
CTLA4P16410 QRSL1P2-201ENST00000418582 964 ntBASIC4.43□□□□□ -1.7
CTLA4P16410 DDX39BP1-205ENST00000422507 192 ntBASIC4.43□□□□□ -1.7
CTLA4P16410 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.43□□□□□ -1.7
CTLA4P16410 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.43□□□□□ -1.7
CTLA4P16410 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.43□□□□□ -1.7
CTLA4P16410 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.43□□□□□ -1.7
CTLA4P16410 AC073052.1-201ENST00000440417 714 ntBASIC4.43□□□□□ -1.7
CTLA4P16410 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC4.43□□□□□ -1.7
CTLA4P16410 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.43□□□□□ -1.7
CTLA4P16410 PPIAP20-201ENST00000449839 135 ntBASIC4.43□□□□□ -1.7
CTLA4P16410 AC097484.1-201ENST00000471148 389 ntBASIC4.43□□□□□ -1.7
CTLA4P16410 RN7SL799P-201ENST00000475891 298 ntBASIC4.43□□□□□ -1.7
CTLA4P16410 AC072052.1-201ENST00000496556 306 ntBASIC4.43□□□□□ -1.7
CTLA4P16410 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.43□□□□□ -1.7
CTLA4P16410 RN7SKP260-201ENST00000516907 149 ntBASIC4.43□□□□□ -1.7
CTLA4P16410 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.43□□□□□ -1.7
CTLA4P16410 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.43□□□□□ -1.7
CTLA4P16410 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.43□□□□□ -1.7
CTLA4P16410 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CTLA4P16410 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.43□□□□□ -1.7
CTLA4P16410 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CTLA4P16410 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.43□□□□□ -1.7
CTLA4P16410 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CTLA4P16410 AL049830.4-201ENST00000555149 351 ntBASIC4.43□□□□□ -1.7
CTLA4P16410 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.43□□□□□ -1.7
CTLA4P16410 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.43□□□□□ -1.7
CTLA4P16410 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.43□□□□□ -1.7
CTLA4P16410 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.43□□□□□ -1.7
CTLA4P16410 MIR6768-201ENST00000610734 72 ntBASIC4.43□□□□□ -1.7
CTLA4P16410 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
CTLA4P16410 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CTLA4P16410 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CTLA4P16410 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.43□□□□□ -1.7
CTLA4P16410 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTLA4P16410 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.43□□□□□ -1.7
CTLA4P16410 AC000374.1-201ENST00000434698 1745 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms