Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 MIR3912-201ENST00000577566 105 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 MIR3915-201ENST00000578518 97 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 MIR5708-201ENST00000579723 85 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 EIF4A2P1-201ENST00000587313 1063 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 AC068790.7-201ENST00000602347 528 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 AC096553.1-201ENST00000605169 829 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 AC004890.3-201ENST00000605566 1095 ntBASIC6.19□□□□□ -1.42
COL6A2P12110 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.19□□□□□ -1.42
COL6A2P12110 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.19□□□□□ -1.42
COL6A2P12110 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.19□□□□□ -1.42
COL6A2P12110 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
COL6A2P12110 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
COL6A2P12110 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
COL6A2P12110 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.19□□□□□ -1.42
COL6A2P12110 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL6A2P12110 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL6A2P12110 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL6A2P12110 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL6A2P12110 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.19□□□□□ -1.42
COL6A2P12110 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
COL6A2P12110 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.18□□□□□ -1.42
COL6A2P12110 AC092724.1-201ENST00000624623 3397 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
COL6A2P12110 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.18□□□□□ -1.42
COL6A2P12110 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL6A2P12110 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL6A2P12110 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL6A2P12110 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
COL6A2P12110 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL6A2P12110 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL6A2P12110 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
COL6A2P12110 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL6A2P12110 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL6A2P12110 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL6A2P12110 MSL3P1-202ENST00000440028 1468 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL6A2P12110 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL6A2P12110 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.18□□□□□ -1.42
COL6A2P12110 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL6A2P12110 AL096800.1-201ENST00000405326 893 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 HMGB3P18-201ENST00000406327 590 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL6A2P12110 AL445213.1-201ENST00000412589 747 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.18□□□□□ -1.42
COL6A2P12110 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.18□□□□□ -1.42
COL6A2P12110 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.18□□□□□ -1.42
COL6A2P12110 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL6A2P12110 NANOGP4-201ENST00000427230 913 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 AC244035.1-201ENST00000430042 390 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 YWHAEP5-201ENST00000431545 765 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.18□□□□□ -1.42
COL6A2P12110 DEFA9P-201ENST00000433042 285 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC6.18□□□□□ -1.42
COL6A2P12110 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.18□□□□□ -1.42
COL6A2P12110 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC6.18□□□□□ -1.42
COL6A2P12110 AC112187.1-201ENST00000455837 479 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 NDUFA12P1-201ENST00000455914 406 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.18□□□□□ -1.42
COL6A2P12110 AC022730.1-201ENST00000473114 568 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.18□□□□□ -1.42
COL6A2P12110 AC104090.1-201ENST00000506341 1171 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC6.18□□□□□ -1.42
COL6A2P12110 AC093816.1-201ENST00000515076 913 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL6A2P12110 IGHV3-63-201ENST00000518422 341 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC6.18□□□□□ -1.42
COL6A2P12110 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.18□□□□□ -1.42
COL6A2P12110 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.18□□□□□ -1.42
COL6A2P12110 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC6.18□□□□□ -1.42
COL6A2P12110 AP000619.2-201ENST00000546014 969 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL6A2P12110 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.18□□□□□ -1.42
COL6A2P12110 ISCA1P3-201ENST00000577104 373 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC6.18□□□□□ -1.42
COL6A2P12110 AP001542.2-201ENST00000593141 364 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.18□□□□□ -1.42
COL6A2P12110 RN7SKP299-201ENST00000606679 301 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 AC092653.1-201ENST00000608509 531 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC6.18□□□□□ -1.42
COL6A2P12110 AC099676.1-201ENST00000608886 657 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 AL159169.2-201ENST00000610061 1269 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 MIR6070-201ENST00000613967 103 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 AK6-205ENST00000618980 483 ntTSL 2 BASIC6.18□□□□□ -1.42
COL6A2P12110 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
COL6A2P12110 AL359757.1-201ENST00000623176 255 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 MIR4278-201ENST00000636094 69 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
COL6A2P12110 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC6.18□□□□□ -1.42
COL6A2P12110 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL6A2P12110 ANKRD20A17P-201ENST00000511745 1330 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.18□□□□□ -1.42
COL6A2P12110 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL6A2P12110 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
COL6A2P12110 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.18□□□□□ -1.42
COL6A2P12110 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL6A2P12110 AP000526.1-201ENST00000603308 1388 ntBASIC6.18□□□□□ -1.42
COL6A2P12110 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL6A2P12110 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms