Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 RN7SKP275-201ENST00000364626 301 ntBASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 PSMA6P1-201ENST00000400275 741 ntBASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 CYCSP45-201ENST00000402289 315 ntBASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 VIM2P-201ENST00000402383 1294 ntBASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 RN7SKP261-201ENST00000410948 278 ntBASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 CHCHD3P1-201ENST00000425516 676 ntBASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 SNRPEP4-201ENST00000435815 279 ntBASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 AKR1D1P1-201ENST00000457236 936 ntBASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 Y_RNA.631-201ENST00000459607 101 ntBASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 RN7SL390P-201ENST00000470634 284 ntBASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 AL163540.1-201ENST00000485382 386 ntBASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 HMGB1P29-201ENST00000505659 499 ntBASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 IGLC4-201ENST00000517690 248 ntBASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 AP000435.1-201ENST00000528539 496 ntBASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 PSMB7P1-201ENST00000556349 514 ntBASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 AC008269.2-201ENST00000561915 1105 ntBASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 RN7SL667P-201ENST00000582817 298 ntBASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 POLR3GP2-201ENST00000588366 668 ntBASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 AC016925.2-201ENST00000605108 242 ntBASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 AC103710.1-201ENST00000610003 901 ntBASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 AP004289.1-201ENST00000436307 2205 ntBASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 MAPK10-319ENST00000641459 2542 ntBASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
C1QTNF9BB2RNN3 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 RNA5SP512-201ENST00000364550 120 ntBASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 AL451142.1-201ENST00000375867 775 ntBASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 Y_RNA.409-201ENST00000383990 98 ntBASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 Y_RNA.474-201ENST00000384341 102 ntBASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 RNU6-185P-201ENST00000384421 107 ntBASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 MIR548I3-201ENST00000408378 149 ntBASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 MIR548I1-201ENST00000408810 149 ntBASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 RN7SKP129-201ENST00000410288 299 ntBASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 AC019050.1-201ENST00000418508 492 ntBASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 MRPL50P4-201ENST00000446432 475 ntBASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 Y_RNA.639-201ENST00000458981 102 ntBASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 Y_RNA.632-201ENST00000459189 102 ntBASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 AC096741.1-201ENST00000472250 846 ntBASIC6.73□□□□□ -1.33
C1QTNF9BB2RNN3 RN7SL174P-201ENST00000475578 289 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms