Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LINC02019-201ENST00000608605 2060 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SRRM4A7MD48 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SRRM4A7MD48 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SRRM4A7MD48 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SRRM4A7MD48 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SRRM4A7MD48 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 RN7SKP6-201ENST00000364795 319 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 MIR551A-201ENST00000385042 96 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 HMGN1P20-201ENST00000411849 300 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 MARK2P12-201ENST00000420129 585 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 AC093155.2-201ENST00000420734 937 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 OR5M12P-201ENST00000423388 929 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 AL133173.1-201ENST00000423458 397 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 HMGN2P27-201ENST00000427352 270 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 AC092685.1-201ENST00000447960 1243 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 RNU7-27P-201ENST00000459281 62 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 VTA1P2-201ENST00000520205 911 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 OR4R2P-201ENST00000530815 597 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 AC079600.1-201ENST00000550326 297 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 IGBP1P1-201ENST00000554337 1009 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 OR11H3P-201ENST00000554547 982 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 MIR7853-201ENST00000584820 132 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 ZNF92P2-201ENST00000600543 1059 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 AP000769.2-201ENST00000602344 396 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 AC073137.1-201ENST00000605636 634 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 AL365181.4-201ENST00000609800 547 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 AL512506.1-201ENST00000613918 449 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 AC007342.8-201ENST00000623278 678 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 AC135068.5-201ENST00000624197 983 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 AC103798.2-201ENST00000624292 632 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SRRM4A7MD48 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SRRM4A7MD48 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SRRM4A7MD48 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SRRM4A7MD48 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SRRM4A7MD48 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
SRRM4A7MD48 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SRRM4A7MD48 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SRRM4A7MD48 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SRRM4A7MD48 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
SRRM4A7MD48 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
SRRM4A7MD48 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SRRM4A7MD48 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
SRRM4A7MD48 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
SRRM4A7MD48 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SRRM4A7MD48 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SRRM4A7MD48 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SRRM4A7MD48 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.4□□□□□ -1.71
SRRM4A7MD48 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
SRRM4A7MD48 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SRRM4A7MD48 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SRRM4A7MD48 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SRRM4A7MD48 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
SRRM4A7MD48 SNORD56.6-201ENST00000384569 71 ntBASIC4.4□□□□□ -1.71
SRRM4A7MD48 ATP5HP3-201ENST00000396994 486 ntBASIC4.4□□□□□ -1.71
SRRM4A7MD48 GAPDHP42-201ENST00000406848 981 ntBASIC4.4□□□□□ -1.71
SRRM4A7MD48 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.4□□□□□ -1.71
SRRM4A7MD48 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.4□□□□□ -1.71
SRRM4A7MD48 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SRRM4A7MD48 ARL2BPP3-201ENST00000421226 480 ntBASIC4.4□□□□□ -1.71
SRRM4A7MD48 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.4□□□□□ -1.71
SRRM4A7MD48 SUMO2P3-201ENST00000438311 288 ntBASIC4.4□□□□□ -1.71
SRRM4A7MD48 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.4□□□□□ -1.71
SRRM4A7MD48 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
SRRM4A7MD48 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.4□□□□□ -1.71
SRRM4A7MD48 NDUFA5P5-201ENST00000468361 342 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms