Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.3□□□□□ -1.4
RGPD3A6NKT7 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RGPD3A6NKT7 AL442639.1-201ENST00000625030 1899 ntBASIC6.3□□□□□ -1.4
RGPD3A6NKT7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RGPD3A6NKT7 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.3□□□□□ -1.4
RGPD3A6NKT7 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.3□□□□□ -1.4
RGPD3A6NKT7 SNORA70C-201ENST00000384538 135 ntBASIC6.3□□□□□ -1.4
RGPD3A6NKT7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC6.3□□□□□ -1.4
RGPD3A6NKT7 AC090018.1-201ENST00000434369 367 ntBASIC6.3□□□□□ -1.4
RGPD3A6NKT7 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.3□□□□□ -1.4
RGPD3A6NKT7 CYCSP34-201ENST00000458172 304 ntBASIC6.3□□□□□ -1.4
RGPD3A6NKT7 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.3□□□□□ -1.4
RGPD3A6NKT7 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.3□□□□□ -1.4
RGPD3A6NKT7 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.3□□□□□ -1.4
RGPD3A6NKT7 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RGPD3A6NKT7 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
RGPD3A6NKT7 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.3□□□□□ -1.4
RGPD3A6NKT7 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.3□□□□□ -1.4
RGPD3A6NKT7 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RGPD3A6NKT7 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
RGPD3A6NKT7 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RGPD3A6NKT7 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RGPD3A6NKT7 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
RGPD3A6NKT7 AC003973.3-201ENST00000624863 2822 ntBASIC6.3□□□□□ -1.4
RGPD3A6NKT7 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RGPD3A6NKT7 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 MIR589-201ENST00000385238 99 ntBASIC6.29□□□□□ -1.4
RGPD3A6NKT7 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 AC012409.3-201ENST00000611343 981 ntBASIC6.29□□□□□ -1.4
RGPD3A6NKT7 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 AC010401.2-201ENST00000575137 4934 ntBASIC6.29□□□□□ -1.4
RGPD3A6NKT7 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 ATP5F1P2-201ENST00000398143 760 ntBASIC6.29□□□□□ -1.4
RGPD3A6NKT7 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 AP001804.1-201ENST00000526868 919 ntBASIC6.29□□□□□ -1.4
RGPD3A6NKT7 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 AC006130.2-201ENST00000586202 326 ntBASIC6.29□□□□□ -1.4
RGPD3A6NKT7 uc_338.7-201ENST00000621834 124 ntBASIC6.29□□□□□ -1.4
RGPD3A6NKT7 AP000843.1-201ENST00000624880 701 ntBASIC6.29□□□□□ -1.4
RGPD3A6NKT7 MIR492-201ENST00000638676 116 ntBASIC6.29□□□□□ -1.4
RGPD3A6NKT7 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RGPD3A6NKT7 AC107980.1-201ENST00000558671 3355 ntBASIC6.28□□□□□ -1.4
RGPD3A6NKT7 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 AC120338.1-201ENST00000625074 1541 ntBASIC6.28□□□□□ -1.4
RGPD3A6NKT7 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 RN7SKP224-201ENST00000364140 325 ntBASIC6.28□□□□□ -1.4
RGPD3A6NKT7 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 OR4C10P-201ENST00000434991 931 ntBASIC6.28□□□□□ -1.4
RGPD3A6NKT7 ACTR3P2-201ENST00000439585 1257 ntBASIC6.28□□□□□ -1.4
RGPD3A6NKT7 RN7SL189P-201ENST00000468631 289 ntBASIC6.28□□□□□ -1.4
RGPD3A6NKT7 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 AC100847.1-201ENST00000611316 481 ntBASIC6.28□□□□□ -1.4
RGPD3A6NKT7 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RGPD3A6NKT7 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
RGPD3A6NKT7 SMG1P6-201ENST00000532337 2930 ntBASIC6.27□□□□□ -1.4
RGPD3A6NKT7 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.27□□□□□ -1.41
RGPD3A6NKT7 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.27□□□□□ -1.41
RGPD3A6NKT7 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.27□□□□□ -1.41
RGPD3A6NKT7 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms