Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 RNU6-891P-201ENST00000384280 111 ntBASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 RNA5SP339-201ENST00000390987 122 ntBASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 AL133325.1-201ENST00000421090 382 ntBASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 HSPD1P12-201ENST00000429127 1069 ntBASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 AC090018.1-201ENST00000434369 367 ntBASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 RSL24D1P2-201ENST00000445584 366 ntBASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 NOP56P2-201ENST00000447491 769 ntBASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 AL645937.3-201ENST00000453647 936 ntBASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 RPL7P41-201ENST00000485823 957 ntBASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 SNORA48.9-201ENST00000516419 162 ntBASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 RNA5SP373-201ENST00000517271 95 ntBASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 AC022360.1-201ENST00000521058 340 ntBASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 AP000859.1-201ENST00000525536 307 ntBASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 AC126177.5-201ENST00000549599 178 ntBASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 RPL10P14-201ENST00000565265 298 ntBASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 AC005252.1-201ENST00000604518 1063 ntBASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 AL162431.4-201ENST00000604674 411 ntBASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 AC000123.3-201ENST00000624029 4975 ntBASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC162PA2VCL2 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 AL138820.1-201ENST00000617901 5305 ntBASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 RNA5SP132-201ENST00000364725 118 ntBASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 SNORA48.4-201ENST00000391089 134 ntBASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 RCC2P2-201ENST00000422174 918 ntBASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 RPS26P41-201ENST00000450370 284 ntBASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 RPS6P2-201ENST00000454208 705 ntBASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 AL049874.2-201ENST00000492636 288 ntBASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 RN7SL447P-201ENST00000494711 245 ntBASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 RPS24P16-201ENST00000497294 392 ntBASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 RNU6-941P-201ENST00000516346 108 ntBASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 IGLVIV-64-201ENST00000518581 301 ntBASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 NMNAT1P5-201ENST00000559657 841 ntBASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 AC011626.1-201ENST00000604710 562 ntBASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 AL133406.3-201ENST00000606817 541 ntBASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 MIR6839-201ENST00000620425 113 ntBASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 AC008079.2-201ENST00000623543 20396 ntBASIC5.29□□□□□ -1.56
CCDC162PA2VCL2 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.28□□□□□ -1.56
CCDC162PA2VCL2 AC133552.1-201ENST00000569988 4007 ntBASIC5.28□□□□□ -1.56
CCDC162PA2VCL2 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CCDC162PA2VCL2 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC162PA2VCL2 AL022322.2-201ENST00000624072 20397 ntBASIC5.28□□□□□ -1.56
CCDC162PA2VCL2 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC162PA2VCL2 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC162PA2VCL2 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms