Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 SNORD51.1-201ENST00000365405 77 ntBASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 U3.32-201ENST00000408116 212 ntBASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 MTND6P12-201ENST00000428247 522 ntBASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC007563.3-201ENST00000433233 371 ntBASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC074367.1-201ENST00000438685 1125 ntBASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 RPL7AP61-201ENST00000443410 636 ntBASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 VN1R48P-201ENST00000448149 1036 ntBASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC239798.3-201ENST00000454459 408 ntBASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC104629.2-201ENST00000468627 598 ntBASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC006427.1-201ENST00000514359 712 ntBASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 BLZF2P-201ENST00000553776 1130 ntBASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 MTND4LP25-201ENST00000570218 163 ntBASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC027243.2-201ENST00000602530 724 ntBASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC009779.8-202ENST00000607990 932 ntBASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AL136370.1-201ENST00000608166 691 ntBASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 MIR6071-201ENST00000616741 78 ntBASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC079298.2-201ENST00000623885 459 ntBASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AP000648.2-201ENST00000624182 404 ntBASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TRBV4-1A0A0J9YWV2 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC010266.2-201ENST00000564741 3255 ntBASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC133552.1-201ENST00000569988 4007 ntBASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC010132.2-201ENST00000295493 1043 ntBASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 RNA5SP234-201ENST00000363916 119 ntBASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 RNU1-146P-201ENST00000364015 165 ntBASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 RNA5SP122-201ENST00000384457 108 ntBASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 SNORD65-201ENST00000391079 73 ntBASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 RN7SKP240-201ENST00000410583 375 ntBASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 TNPO1P1-201ENST00000423641 1138 ntBASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC019084.1-201ENST00000457337 432 ntBASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 HMGB1P47-201ENST00000511281 589 ntBASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC134349.2-201ENST00000535136 910 ntBASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AL096712.1-201ENST00000614561 159 ntBASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 BX005214.3-202ENST00000619809 325 ntBASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AC019080.5-201ENST00000624891 757 ntBASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 AL672167.1-204ENST00000641875 3017 ntBASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRBV4-1A0A0J9YWV2 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms