Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RNU4-27P-201ENST00000410889 139 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 RPL26P37-201ENST00000411983 438 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 AL024507.1-201ENST00000412741 274 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 RPS26P13-201ENST00000419030 330 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 MTCYBP7-201ENST00000419540 1134 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.19□□□□□ -1.42
COL20A1Q9P218 OR10T1P-201ENST00000424327 947 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.19□□□□□ -1.42
COL20A1Q9P218 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.19□□□□□ -1.42
COL20A1Q9P218 SNRPFP2-201ENST00000440710 251 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.19□□□□□ -1.42
COL20A1Q9P218 RPL7P55-201ENST00000450522 746 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 AC092691.2-201ENST00000461787 803 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 RPL7P6-201ENST00000480903 738 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 HMGB1P44-201ENST00000508597 572 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.19□□□□□ -1.42
COL20A1Q9P218 RNA5SP373-201ENST00000517271 95 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC6.19□□□□□ -1.42
COL20A1Q9P218 HMGB1P40-201ENST00000525121 540 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 AP003080.1-202ENST00000526526 915 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 AC126915.2-201ENST00000610957 190 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL20A1Q9P218 AC021422.1-201ENST00000621212 473 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 AC092159.4-201ENST00000624944 550 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 AP003485.1-201ENST00000625093 753 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 OR4G3P-201ENST00000633500 913 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 CYP4F35P-202ENST00000636121 390 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.19□□□□□ -1.42
COL20A1Q9P218 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL20A1Q9P218 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL20A1Q9P218 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL20A1Q9P218 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL20A1Q9P218 OR55B1P-203ENST00000641518 2602 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL20A1Q9P218 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL20A1Q9P218 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL20A1Q9P218 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.18□□□□□ -1.42
COL20A1Q9P218 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COL20A1Q9P218 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COL20A1Q9P218 RPL23P2-201ENST00000320371 421 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL20A1Q9P218 SNORA70-201ENST00000384436 135 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 RNA5SP105-201ENST00000391123 113 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COL20A1Q9P218 MTATP6P31-201ENST00000406985 692 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.18□□□□□ -1.42
COL20A1Q9P218 AL158050.1-201ENST00000416077 457 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.18□□□□□ -1.42
COL20A1Q9P218 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL20A1Q9P218 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.18□□□□□ -1.42
COL20A1Q9P218 AL590399.2-201ENST00000427536 309 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 RPL7P56-201ENST00000429441 717 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 FAM96AP1-201ENST00000430879 482 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.18□□□□□ -1.42
COL20A1Q9P218 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.18□□□□□ -1.42
COL20A1Q9P218 RPL6P5-201ENST00000445678 828 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 AL451063.1-201ENST00000450164 1133 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 AL672138.1-201ENST00000450604 1015 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.18□□□□□ -1.42
COL20A1Q9P218 AC008379.1-201ENST00000463655 464 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 AC116562.1-201ENST00000485355 781 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 PPM1AP1-201ENST00000502740 1135 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.18□□□□□ -1.42
COL20A1Q9P218 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.18□□□□□ -1.42
COL20A1Q9P218 SCARNA16.4-201ENST00000516956 187 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.18□□□□□ -1.42
COL20A1Q9P218 HAUS8P1-201ENST00000549005 542 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 NMNAT1P5-201ENST00000559657 841 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 AC026741.1-201ENST00000605892 482 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC6.18□□□□□ -1.42
COL20A1Q9P218 AC027449.1-201ENST00000608890 407 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 AP005229.2-201ENST00000609980 697 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 AL352984.2-202ENST00000613699 155 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 AC093875.1-201ENST00000623688 504 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 AC009452.1-201ENST00000640823 606 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL20A1Q9P218 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.18□□□□□ -1.42
COL20A1Q9P218 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL20A1Q9P218 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.18□□□□□ -1.42
COL20A1Q9P218 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.18□□□□□ -1.42
COL20A1Q9P218 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL20A1Q9P218 AC245100.2-201ENST00000454544 1679 ntBASIC6.17□□□□□ -1.42
COL20A1Q9P218 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
COL20A1Q9P218 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.17□□□□□ -1.42
COL20A1Q9P218 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.17□□□□□ -1.42
COL20A1Q9P218 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL20A1Q9P218 AC093297.3-201ENST00000607056 2517 ntBASIC6.17□□□□□ -1.42
COL20A1Q9P218 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL20A1Q9P218 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.17□□□□□ -1.42
COL20A1Q9P218 RNU1-106P-201ENST00000384382 164 ntBASIC6.17□□□□□ -1.42
COL20A1Q9P218 RNU1-149P-201ENST00000390870 161 ntBASIC6.17□□□□□ -1.42
COL20A1Q9P218 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.17□□□□□ -1.42
COL20A1Q9P218 RIMKLBP2-201ENST00000424737 654 ntBASIC6.17□□□□□ -1.42
COL20A1Q9P218 NPM1P22-201ENST00000427761 952 ntBASIC6.17□□□□□ -1.42
COL20A1Q9P218 AL160175.1-201ENST00000428124 247 ntBASIC6.17□□□□□ -1.42
COL20A1Q9P218 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.17□□□□□ -1.42
COL20A1Q9P218 MTCYBP29-201ENST00000436327 1006 ntBASIC6.17□□□□□ -1.42
COL20A1Q9P218 GAPDHP58-201ENST00000438477 1006 ntBASIC6.17□□□□□ -1.42
COL20A1Q9P218 SNORD125-201ENST00000459538 96 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms