Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL445528.1-201ENST00000426330 420 ntBASIC5.5□□□□□ -1.53
PCDH9Q9HC56 AL392003.1-201ENST00000434394 243 ntBASIC5.5□□□□□ -1.53
PCDH9Q9HC56 TCEA1P3-201ENST00000443005 880 ntBASIC5.5□□□□□ -1.53
PCDH9Q9HC56 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 AC105399.1-202ENST00000447303 205 ntBASIC5.5□□□□□ -1.53
PCDH9Q9HC56 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 EIF1P7-201ENST00000487533 337 ntBASIC5.5□□□□□ -1.53
PCDH9Q9HC56 RN7SL814P-201ENST00000487715 300 ntBASIC5.5□□□□□ -1.53
PCDH9Q9HC56 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 MYL12BP2-201ENST00000503948 512 ntBASIC5.5□□□□□ -1.53
PCDH9Q9HC56 HMGB1P44-201ENST00000508597 572 ntBASIC5.5□□□□□ -1.53
PCDH9Q9HC56 RNA5SP362-201ENST00000516048 118 ntBASIC5.5□□□□□ -1.53
PCDH9Q9HC56 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 AC127024.5-201ENST00000580085 462 ntBASIC5.5□□□□□ -1.53
PCDH9Q9HC56 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 AC000068.2-201ENST00000608816 460 ntBASIC5.5□□□□□ -1.53
PCDH9Q9HC56 OR8G7P-201ENST00000616658 848 ntBASIC5.5□□□□□ -1.53
PCDH9Q9HC56 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 AC006453.5-201ENST00000636451 619 ntBASIC5.5□□□□□ -1.53
PCDH9Q9HC56 AC106858.1-201ENST00000637497 429 ntBASIC5.5□□□□□ -1.53
PCDH9Q9HC56 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
PCDH9Q9HC56 AC006484.1-201ENST00000435086 1884 ntBASIC5.49□□□□□ -1.53
PCDH9Q9HC56 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 AP005435.3-201ENST00000531260 3198 ntBASIC5.49□□□□□ -1.53
PCDH9Q9HC56 SMG1P7-201ENST00000565246 2704 ntBASIC5.49□□□□□ -1.53
PCDH9Q9HC56 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 NAP1L4P2-201ENST00000425958 899 ntBASIC5.49□□□□□ -1.53
PCDH9Q9HC56 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 AL121776.1-201ENST00000429337 372 ntBASIC5.49□□□□□ -1.53
PCDH9Q9HC56 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 RPL7P41-201ENST00000485823 957 ntBASIC5.49□□□□□ -1.53
PCDH9Q9HC56 MTND3P24-201ENST00000506306 329 ntBASIC5.49□□□□□ -1.53
PCDH9Q9HC56 AC025768.1-201ENST00000510057 267 ntBASIC5.49□□□□□ -1.53
PCDH9Q9HC56 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 AP004607.2-201ENST00000533949 322 ntBASIC5.49□□□□□ -1.53
PCDH9Q9HC56 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 AC022884.2-201ENST00000578535 580 ntBASIC5.49□□□□□ -1.53
PCDH9Q9HC56 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 FAM72A-208ENST00000607379 1139 ntBASIC5.49□□□□□ -1.53
PCDH9Q9HC56 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 AL451049.1-201ENST00000608672 497 ntBASIC5.49□□□□□ -1.53
PCDH9Q9HC56 AC135803.1-201ENST00000608748 565 ntBASIC5.49□□□□□ -1.53
PCDH9Q9HC56 LINC00216-201ENST00000623548 1126 ntBASIC5.49□□□□□ -1.53
PCDH9Q9HC56 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 AL049767.1-202ENST00000637826 242 ntBASIC5.49□□□□□ -1.53
PCDH9Q9HC56 MIR4302-201ENST00000638058 60 ntBASIC5.49□□□□□ -1.53
PCDH9Q9HC56 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.49□□□□□ -1.53
PCDH9Q9HC56 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PCDH9Q9HC56 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 AC073136.1-201ENST00000449426 2884 ntBASIC5.48□□□□□ -1.53
PCDH9Q9HC56 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 AL512283.1-201ENST00000606756 1384 ntBASIC5.48□□□□□ -1.53
PCDH9Q9HC56 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 RNA5SP132-201ENST00000364725 118 ntBASIC5.48□□□□□ -1.53
PCDH9Q9HC56 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.48□□□□□ -1.53
PCDH9Q9HC56 RN7SKP206-201ENST00000410823 293 ntBASIC5.48□□□□□ -1.53
PCDH9Q9HC56 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 SRSF1P1-201ENST00000424058 520 ntBASIC5.48□□□□□ -1.53
PCDH9Q9HC56 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms