Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 CLINT1-210ENST00000530742 3344 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 CX3CL1-201ENST00000006053 3321 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 ZMYND8-205ENST00000360911 4991 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 BLOC1S6-218ENST00000568816 4013 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 ZMIZ2-203ENST00000413916 3773 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 MORC2-201ENST00000215862 4469 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 DDX31-205ENST00000438527 2814 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 SCARA3-201ENST00000301904 3510 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 CCDC40-203ENST00000374877 3544 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 JADE1-214ENST00000611140 5648 ntAPPRIS P3 TSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 L3MBTL2-201ENST00000216237 3296 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 SLC4A9-205ENST00000507527 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 SIX1-201ENST00000247182 3996 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 PTGS1-205ENST00000540753 5375 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 ST3GAL1-201ENST00000399640 6764 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 DDX11-202ENST00000350437 3724 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 SPEF2-201ENST00000282469 3026 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 N4BP2L1-202ENST00000380130 3046 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 KLF7-203ENST00000421199 3037 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 GALNT17-205ENST00000618959 3012 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 MIR3142HG-201ENST00000517927 2301 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 PXYLP1-207ENST00000508812 4158 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 POMGNT1-203ENST00000396420 3480 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 C14orf159-229ENST00000523816 2764 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AL592287.1-201ENST00000637598 2074 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 PDE4C-203ENST00000447275 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF557-202ENST00000414706 5736 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 MCOLN3-202ENST00000370587 2953 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 MAP3K9-204ENST00000554146 2982 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 PKD1L2-202ENST00000337114 3427 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 PGLYRP4-201ENST00000359650 1834 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 PDE4D-207ENST00000405755 2294 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF18-202ENST00000454073 2261 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 FAM13A-212ENST00000508369 3169 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 C5orf22-201ENST00000325366 3612 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 DPY19L2P1-202ENST00000454445 2909 ntBASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 PIPSL-201ENST00000480546 3350 ntBASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 PSG9-209ENST00000621109 2019 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 SPATA31E1-201ENST00000325643 4478 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 RCBTB1-202ENST00000378302 4033 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 URGCP-205ENST00000443736 3596 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 PPP1R12B-201ENST00000290419 2227 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 LY9-205ENST00000392203 2213 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 FAM71C-201ENST00000324341 1796 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 ATG16L1-204ENST00000392018 3313 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 R3HDM2-205ENST00000403821 3347 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 CFB-271ENST00000425368 2862 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 EGFLAM-203ENST00000354891 3963 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 STRADA-229ENST00000638698 1302 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 INTS9-213ENST00000521777 2430 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 NDST2-207ENST00000639645 2448 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AP3B2-215ENST00000620652 3729 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 DEPDC5-206ENST00000400249 5458 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF226-204ENST00000454662 2605 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 FPR2-202ENST00000598776 2621 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AL451074.2-201ENST00000423121 2150 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 KEL-201ENST00000355265 2812 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AC022384.1-202ENST00000450534 2831 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 LASP1-204ENST00000435347 3492 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 ZHX3-214ENST00000559234 6296 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 GREB1L-201ENST00000269218 5600 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 C14orf119-201ENST00000319074 3660 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 OFD1P17-201ENST00000437639 3018 ntBASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AL079305.1-201ENST00000623159 3008 ntBASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 FCGR3A-202ENST00000367969 2385 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 MME-212ENST00000493237 2556 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 THRAP3P1-201ENST00000411753 2786 ntBASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AL138889.1-202ENST00000451317 3630 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 GNB5-201ENST00000261837 8906 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 IGSF3-201ENST00000318837 3842 ntAPPRIS P4 TSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AL450998.1-201ENST00000321418 438 ntBASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AC138393.1-203ENST00000327086 343 ntBASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms