Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 RPS27AP16-201ENST00000492222 470 ntBASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CSMD1Q96PZ7 AC093829.1-201ENST00000506662 1618 ntBASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 AC079298.1-201ENST00000625026 1619 ntBASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 HNRNPCP4-201ENST00000571636 900 ntBASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 AC005252.1-201ENST00000604518 1063 ntBASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 MIR492-201ENST00000638676 116 ntBASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 LTBP1-204ENST00000407925 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 OR8G2P-201ENST00000412796 908 ntBASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 AL162591.2-201ENST00000449634 317 ntBASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 HMGB1P4-201ENST00000455362 567 ntBASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 MIR3944-201ENST00000581277 108 ntBASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 AC108738.1-201ENST00000603703 237 ntBASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 AC096577.2-201ENST00000611455 153 ntBASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 CASC19-243ENST00000641588 1546 ntBASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 AL731532.1-201ENST00000623972 4236 ntBASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 STX3-208ENST00000641815 3236 ntBASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 MTCO1P54-201ENST00000430139 712 ntBASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 YWHAZP2-201ENST00000440317 728 ntBASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 AC093014.1-201ENST00000548926 724 ntBASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CSMD1Q96PZ7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 MIR483-201ENST00000385070 76 ntBASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 ATP5HP3-201ENST00000396994 486 ntBASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 RN7SKP202-201ENST00000410439 330 ntBASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 CRYBB2P1-203ENST00000415709 538 ntBASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 RNF10P1-201ENST00000418589 369 ntBASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 AL117339.2-201ENST00000430475 180 ntBASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 LPP-208ENST00000448637 5835 ntTSL 5 BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 MIR449B-201ENST00000384995 97 ntBASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 GLUD1P3-202ENST00000508551 200 ntBASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.11□□□□□ -1.75
CSMD1Q96PZ7 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms