Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NPAS4Q8IUM7 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPAS4Q8IUM7 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AC104966.1-201ENST00000467010 1464 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AC023490.2-201ENST00000359859 470 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 MIR199B-201ENST00000384849 110 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 RPL23AP47-201ENST00000408017 460 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 SKP1P3-201ENST00000429280 487 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 GCA-203ENST00000429691 824 ntTSL 3 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 RPS25P9-201ENST00000435591 252 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 PCBP2P1-201ENST00000437262 977 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AC110602.1-201ENST00000437414 318 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 RPS27AP15-201ENST00000447672 466 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AC094085.1-201ENST00000468914 584 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AC112198.1-201ENST00000505369 1220 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 RNA5SP418-201ENST00000515951 117 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AP001207.1-201ENST00000524051 481 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 TRIM51DP-201ENST00000529746 596 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AC023968.1-201ENST00000560719 475 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AC078795.2-201ENST00000602835 1252 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 WISP1-OT1-201ENST00000602893 642 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AC010333.3-201ENST00000615100 402 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AC099842.1-201ENST00000619919 596 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AL590240.3-201ENST00000621416 943 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AC018692.2-201ENST00000624130 348 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 PCMTD1P7-201ENST00000634506 357 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 CASC19-246ENST00000641625 1606 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AL161901.1-201ENST00000624954 3425 ntBASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPAS4Q8IUM7 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC092104.1-201ENST00000497346 1441 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC007342.5-201ENST00000571340 2142 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 PRNCR1-201ENST00000635449 12727 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC020978.8-201ENST00000571975 3022 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 RN7SKP275-201ENST00000364626 301 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 HSPD1P16-201ENST00000402302 394 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 RPL5P20-201ENST00000403848 896 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AL133264.1-201ENST00000407157 562 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms