Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 NCSTNP1-201ENST00000406229 144 ntBASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AL512422.1-201ENST00000407033 553 ntBASIC8.37□□□□□ -1.07
RC3H1Q5TC82 HMGN1P20-201ENST00000411849 300 ntBASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 CYP4F32P-201ENST00000426492 504 ntBASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 RN7SL870P-201ENST00000460111 296 ntBASIC8.37□□□□□ -1.07
RC3H1Q5TC82 RPL5P24-201ENST00000463742 885 ntBASIC8.37□□□□□ -1.07
RC3H1Q5TC82 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AC096576.1-201ENST00000489014 359 ntBASIC8.37□□□□□ -1.07
RC3H1Q5TC82 RN7SL101P-201ENST00000496350 279 ntBASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 OR7E99P-201ENST00000505750 922 ntBASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AC131392.1-201ENST00000506490 633 ntBASIC8.37□□□□□ -1.07
RC3H1Q5TC82 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 RN7SKP35-201ENST00000517210 151 ntBASIC8.37□□□□□ -1.07
RC3H1Q5TC82 IGKV3D-25-201ENST00000519599 235 ntBASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 MIR3668-201ENST00000582138 75 ntBASIC8.37□□□□□ -1.07
RC3H1Q5TC82 RN7SL404P-201ENST00000582421 281 ntBASIC8.37□□□□□ -1.07
RC3H1Q5TC82 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AC060780.3-201ENST00000589464 80 ntBASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AL050343.2-201ENST00000607338 280 ntBASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AC091768.1-201ENST00000609258 930 ntBASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AC124864.2-201ENST00000624736 186 ntBASIC8.37□□□□□ -1.07
RC3H1Q5TC82 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 ATE1-AS1-202ENST00000636460 506 ntBASIC8.37□□□□□ -1.07
RC3H1Q5TC82 NPL-212ENST00000614468 2376 ntTSL 5 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 Z93929.1-201ENST00000418200 1475 ntBASIC8.37□□□□□ -1.07
RC3H1Q5TC82 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 LPAL2-203ENST00000454031 2498 ntBASIC8.37□□□□□ -1.07
RC3H1Q5TC82 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 AC092111.2-201ENST00000611627 1414 ntBASIC8.37□□□□□ -1.07
RC3H1Q5TC82 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RC3H1Q5TC82 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 AL353743.4-201ENST00000422653 1547 ntBASIC8.36□□□□□ -1.07
RC3H1Q5TC82 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 XKRYP4-201ENST00000414395 483 ntBASIC8.36□□□□□ -1.07
RC3H1Q5TC82 AC007390.1-201ENST00000415722 356 ntBASIC8.36□□□□□ -1.07
RC3H1Q5TC82 AC096644.3-201ENST00000416788 338 ntBASIC8.36□□□□□ -1.07
RC3H1Q5TC82 LINC00993-201ENST00000420453 540 ntBASIC8.36□□□□□ -1.07
RC3H1Q5TC82 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 RPL5P34-201ENST00000426545 891 ntBASIC8.36□□□□□ -1.07
RC3H1Q5TC82 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 AC094019.1-201ENST00000434678 472 ntBASIC8.36□□□□□ -1.07
RC3H1Q5TC82 TMX2P1-201ENST00000436507 708 ntBASIC8.36□□□□□ -1.07
RC3H1Q5TC82 AL050341.1-201ENST00000447743 313 ntBASIC8.36□□□□□ -1.07
RC3H1Q5TC82 XKRYP5-201ENST00000449659 483 ntBASIC8.36□□□□□ -1.07
RC3H1Q5TC82 AC104109.1-201ENST00000498563 436 ntBASIC8.36□□□□□ -1.07
RC3H1Q5TC82 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 WBP1LP4-201ENST00000505043 344 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms