Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RPL5P25-201ENST00000441148 775 ntBASIC5.52□□□□□ -1.53
LIMK1P53667 RAB28P3-201ENST00000448325 597 ntBASIC5.52□□□□□ -1.53
LIMK1P53667 AL035090.1-201ENST00000454835 332 ntBASIC5.52□□□□□ -1.53
LIMK1P53667 RN7SL738P-201ENST00000470264 297 ntBASIC5.52□□□□□ -1.53
LIMK1P53667 AC105918.1-201ENST00000474399 838 ntBASIC5.52□□□□□ -1.53
LIMK1P53667 BX284632.1-201ENST00000478218 541 ntBASIC5.52□□□□□ -1.53
LIMK1P53667 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.52□□□□□ -1.53
LIMK1P53667 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.52□□□□□ -1.53
LIMK1P53667 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.52□□□□□ -1.53
LIMK1P53667 AC104997.1-201ENST00000519761 717 ntBASIC5.52□□□□□ -1.53
LIMK1P53667 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.52□□□□□ -1.53
LIMK1P53667 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.52□□□□□ -1.53
LIMK1P53667 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LIMK1P53667 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.52□□□□□ -1.53
LIMK1P53667 AC063949.1-201ENST00000552900 865 ntBASIC5.52□□□□□ -1.53
LIMK1P53667 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.52□□□□□ -1.53
LIMK1P53667 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.52□□□□□ -1.53
LIMK1P53667 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.52□□□□□ -1.53
LIMK1P53667 AC060780.2-201ENST00000589047 198 ntBASIC5.52□□□□□ -1.53
LIMK1P53667 MIR132-201ENST00000591554 101 ntBASIC5.52□□□□□ -1.53
LIMK1P53667 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.52□□□□□ -1.53
LIMK1P53667 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.52□□□□□ -1.53
LIMK1P53667 KATNBL1P1-201ENST00000605192 748 ntBASIC5.52□□□□□ -1.53
LIMK1P53667 AL021368.1-201ENST00000607490 540 ntBASIC5.52□□□□□ -1.53
LIMK1P53667 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.52□□□□□ -1.53
LIMK1P53667 AL118522.2-201ENST00000616045 615 ntBASIC5.52□□□□□ -1.53
LIMK1P53667 AL353662.3-201ENST00000625131 237 ntBASIC5.52□□□□□ -1.53
LIMK1P53667 MIR7641-1-201ENST00000627518 61 ntBASIC5.52□□□□□ -1.53
LIMK1P53667 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK1P53667 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK1P53667 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
LIMK1P53667 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
LIMK1P53667 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK1P53667 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
LIMK1P53667 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK1P53667 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIMK1P53667 AC107027.3-201ENST00000565095 3473 ntBASIC5.51□□□□□ -1.53
LIMK1P53667 AL603750.1-201ENST00000624216 1717 ntBASIC5.51□□□□□ -1.53
LIMK1P53667 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
LIMK1P53667 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.51□□□□□ -1.53
LIMK1P53667 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIMK1P53667 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.51□□□□□ -1.53
LIMK1P53667 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.51□□□□□ -1.53
LIMK1P53667 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.51□□□□□ -1.53
LIMK1P53667 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LIMK1P53667 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIMK1P53667 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LIMK1P53667 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.51□□□□□ -1.53
LIMK1P53667 AC004076.2-201ENST00000620532 3323 ntBASIC5.51□□□□□ -1.53
LIMK1P53667 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.51□□□□□ -1.53
LIMK1P53667 RNU4-7P-201ENST00000364758 141 ntBASIC5.51□□□□□ -1.53
LIMK1P53667 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIMK1P53667 AL589655.1-201ENST00000405398 482 ntBASIC5.51□□□□□ -1.53
LIMK1P53667 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.51□□□□□ -1.53
LIMK1P53667 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.51□□□□□ -1.53
LIMK1P53667 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.51□□□□□ -1.53
LIMK1P53667 RPS27AP6-201ENST00000427962 448 ntBASIC5.51□□□□□ -1.53
LIMK1P53667 USP9YP9-201ENST00000429406 715 ntBASIC5.51□□□□□ -1.53
LIMK1P53667 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.51□□□□□ -1.53
LIMK1P53667 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.51□□□□□ -1.53
LIMK1P53667 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.51□□□□□ -1.53
LIMK1P53667 RPS3AP41-201ENST00000462701 778 ntBASIC5.51□□□□□ -1.53
LIMK1P53667 AC104629.2-201ENST00000468627 598 ntBASIC5.51□□□□□ -1.53
LIMK1P53667 RPL5P22-201ENST00000480199 884 ntBASIC5.51□□□□□ -1.53
LIMK1P53667 RN7SL809P-201ENST00000482040 297 ntBASIC5.51□□□□□ -1.53
LIMK1P53667 AK4P6-201ENST00000505168 528 ntBASIC5.51□□□□□ -1.53
LIMK1P53667 HAUS1P1-201ENST00000505275 832 ntBASIC5.51□□□□□ -1.53
LIMK1P53667 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.51□□□□□ -1.53
LIMK1P53667 snoU109.6-201ENST00000516831 118 ntBASIC5.51□□□□□ -1.53
LIMK1P53667 RN7SKP99-201ENST00000517028 307 ntBASIC5.51□□□□□ -1.53
LIMK1P53667 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.51□□□□□ -1.53
LIMK1P53667 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.51□□□□□ -1.53
LIMK1P53667 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.51□□□□□ -1.53
LIMK1P53667 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.51□□□□□ -1.53
LIMK1P53667 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.51□□□□□ -1.53
LIMK1P53667 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.51□□□□□ -1.53
LIMK1P53667 AC079075.1-201ENST00000559543 878 ntBASIC5.51□□□□□ -1.53
LIMK1P53667 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.51□□□□□ -1.53
LIMK1P53667 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.51□□□□□ -1.53
LIMK1P53667 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.51□□□□□ -1.53
LIMK1P53667 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.51□□□□□ -1.53
LIMK1P53667 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
LIMK1P53667 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LIMK1P53667 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
LIMK1P53667 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIMK1P53667 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
LIMK1P53667 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
LIMK1P53667 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIMK1P53667 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
LIMK1P53667 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
LIMK1P53667 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIMK1P53667 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
LIMK1P53667 CASC19-281ENST00000642118 1554 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LIMK1P53667 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LIMK1P53667 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LIMK1P53667 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
LIMK1P53667 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
LIMK1P53667 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 247.7 ms