Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
BRCA2P51587 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
BRCA2P51587 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
BRCA2P51587 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
BRCA2P51587 RNU1-82P-201ENST00000390851 165 ntBASIC5.27□□□□□ -1.57
BRCA2P51587 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.27□□□□□ -1.57
BRCA2P51587 AC016550.3-201ENST00000515706 767 ntBASIC5.27□□□□□ -1.57
BRCA2P51587 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
BRCA2P51587 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.27□□□□□ -1.57
BRCA2P51587 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.27□□□□□ -1.57
BRCA2P51587 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.27□□□□□ -1.57
BRCA2P51587 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
BRCA2P51587 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
BRCA2P51587 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
BRCA2P51587 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
BRCA2P51587 AL359195.2-201ENST00000623657 4412 ntBASIC5.27□□□□□ -1.57
BRCA2P51587 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
BRCA2P51587 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
BRCA2P51587 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
BRCA2P51587 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
BRCA2P51587 AC008481.1-201ENST00000463278 396 ntBASIC5.26□□□□□ -1.57
BRCA2P51587 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.26□□□□□ -1.57
BRCA2P51587 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.26□□□□□ -1.57
BRCA2P51587 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.26□□□□□ -1.57
BRCA2P51587 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.26□□□□□ -1.57
BRCA2P51587 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.26□□□□□ -1.57
BRCA2P51587 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
BRCA2P51587 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
BRCA2P51587 AC105342.1-201ENST00000378334 6848 ntBASIC5.26□□□□□ -1.57
BRCA2P51587 DDX52-213ENST00000617633 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
BRCA2P51587 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
BRCA2P51587 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
BRCA2P51587 SMARCA2-258ENST00000637103 5657 ntTSL 5 BASIC5.26□□□□□ -1.57
BRCA2P51587 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.26□□□□□ -1.57
BRCA2P51587 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
BRCA2P51587 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.26□□□□□ -1.57
BRCA2P51587 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.26□□□□□ -1.57
BRCA2P51587 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
BRCA2P51587 SNORA70H-201ENST00000383910 135 ntBASIC5.26□□□□□ -1.57
BRCA2P51587 SNORA70J-201ENST00000384182 135 ntBASIC5.26□□□□□ -1.57
BRCA2P51587 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.26□□□□□ -1.57
BRCA2P51587 AC079168.2-201ENST00000453977 416 ntBASIC5.26□□□□□ -1.57
BRCA2P51587 RN7SL691P-201ENST00000494487 301 ntBASIC5.26□□□□□ -1.57
BRCA2P51587 RN7SL558P-201ENST00000497468 299 ntBASIC5.26□□□□□ -1.57
BRCA2P51587 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.26□□□□□ -1.57
BRCA2P51587 ZNF415P1-201ENST00000582279 1166 ntBASIC5.26□□□□□ -1.57
BRCA2P51587 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.26□□□□□ -1.57
BRCA2P51587 AL160281.1-201ENST00000605307 311 ntBASIC5.26□□□□□ -1.57
BRCA2P51587 BX005214.3-202ENST00000619809 325 ntBASIC5.26□□□□□ -1.57
BRCA2P51587 MIR8059-201ENST00000620427 81 ntBASIC5.26□□□□□ -1.57
BRCA2P51587 AC130448.2-201ENST00000624082 374 ntBASIC5.26□□□□□ -1.57
BRCA2P51587 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
BRCA2P51587 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC5.26□□□□□ -1.57
BRCA2P51587 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
BRCA2P51587 AL731532.1-201ENST00000623972 4236 ntBASIC5.26□□□□□ -1.57
BRCA2P51587 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
BRCA2P51587 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.26□□□□□ -1.57
BRCA2P51587 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
BRCA2P51587 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.26□□□□□ -1.57
BRCA2P51587 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.26□□□□□ -1.57
BRCA2P51587 RPL7P41-201ENST00000485823 957 ntBASIC5.26□□□□□ -1.57
BRCA2P51587 MIR2116-201ENST00000517221 80 ntBASIC5.26□□□□□ -1.57
BRCA2P51587 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.26□□□□□ -1.57
BRCA2P51587 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.26□□□□□ -1.57
BRCA2P51587 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.26□□□□□ -1.57
BRCA2P51587 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.26□□□□□ -1.57
BRCA2P51587 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.26□□□□□ -1.57
BRCA2P51587 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.26□□□□□ -1.57
BRCA2P51587 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
BRCA2P51587 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
BRCA2P51587 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
BRCA2P51587 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
BRCA2P51587 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.25□□□□□ -1.57
BRCA2P51587 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.25□□□□□ -1.57
BRCA2P51587 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.25□□□□□ -1.57
BRCA2P51587 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
BRCA2P51587 AL158163.1-201ENST00000603915 1649 ntBASIC5.25□□□□□ -1.57
BRCA2P51587 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
BRCA2P51587 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
BRCA2P51587 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.25□□□□□ -1.57
BRCA2P51587 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
BRCA2P51587 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
BRCA2P51587 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
BRCA2P51587 NDUFB4P4-201ENST00000404822 243 ntBASIC5.25□□□□□ -1.57
BRCA2P51587 RN7SKP202-201ENST00000410439 330 ntBASIC5.25□□□□□ -1.57
BRCA2P51587 TBCAP2-201ENST00000416175 326 ntBASIC5.25□□□□□ -1.57
BRCA2P51587 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.25□□□□□ -1.57
BRCA2P51587 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
BRCA2P51587 AC091564.1-201ENST00000464563 479 ntBASIC5.25□□□□□ -1.57
BRCA2P51587 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
BRCA2P51587 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.25□□□□□ -1.57
BRCA2P51587 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
BRCA2P51587 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
BRCA2P51587 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
BRCA2P51587 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC5.25□□□□□ -1.57
BRCA2P51587 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.25□□□□□ -1.57
BRCA2P51587 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
BRCA2P51587 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
BRCA2P51587 AC018765.1-201ENST00000623357 3446 ntBASIC5.25□□□□□ -1.57
BRCA2P51587 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms