Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC4.65□□□□□ -1.66
CDX1P47902 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDX1P47902 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CDX1P47902 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDX1P47902 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
CDX1P47902 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CDX1P47902 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CDX1P47902 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDX1P47902 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDX1P47902 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDX1P47902 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CDX1P47902 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CDX1P47902 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDX1P47902 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDX1P47902 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDX1P47902 OR10R3P-201ENST00000361688 942 ntBASIC4.65□□□□□ -1.67
CDX1P47902 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDX1P47902 SNRPEP6-201ENST00000407465 277 ntBASIC4.65□□□□□ -1.67
CDX1P47902 AC010385.1-201ENST00000412374 256 ntBASIC4.65□□□□□ -1.67
CDX1P47902 MYL6P5-201ENST00000412707 459 ntBASIC4.65□□□□□ -1.67
CDX1P47902 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.65□□□□□ -1.67
CDX1P47902 PTCD2P2-201ENST00000415579 1095 ntBASIC4.65□□□□□ -1.67
CDX1P47902 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.65□□□□□ -1.67
CDX1P47902 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.65□□□□□ -1.67
CDX1P47902 NPM1P22-201ENST00000427761 952 ntBASIC4.65□□□□□ -1.67
CDX1P47902 EIF2S2P3-201ENST00000428356 999 ntBASIC4.65□□□□□ -1.67
CDX1P47902 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.65□□□□□ -1.67
CDX1P47902 AL389925.1-201ENST00000432257 728 ntBASIC4.65□□□□□ -1.67
CDX1P47902 AL035458.1-201ENST00000433096 585 ntBASIC4.65□□□□□ -1.67
CDX1P47902 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.65□□□□□ -1.67
CDX1P47902 BMS1P10-201ENST00000443754 1120 ntBASIC4.65□□□□□ -1.67
CDX1P47902 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDX1P47902 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CDX1P47902 RPL7AP52-201ENST00000458096 790 ntBASIC4.65□□□□□ -1.67
CDX1P47902 RN7SL269P-201ENST00000467795 305 ntBASIC4.65□□□□□ -1.67
CDX1P47902 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.65□□□□□ -1.67
CDX1P47902 RN7SL188P-201ENST00000469842 285 ntBASIC4.65□□□□□ -1.67
CDX1P47902 CCDC11P1-201ENST00000503137 1162 ntBASIC4.65□□□□□ -1.67
CDX1P47902 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.65□□□□□ -1.67
CDX1P47902 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.65□□□□□ -1.67
CDX1P47902 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.65□□□□□ -1.67
CDX1P47902 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.65□□□□□ -1.67
CDX1P47902 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.65□□□□□ -1.67
CDX1P47902 MTND1P36-201ENST00000522384 936 ntBASIC4.65□□□□□ -1.67
CDX1P47902 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDX1P47902 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDX1P47902 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.65□□□□□ -1.67
CDX1P47902 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.65□□□□□ -1.67
CDX1P47902 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.65□□□□□ -1.67
CDX1P47902 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.65□□□□□ -1.67
CDX1P47902 MIR4776-2-201ENST00000580204 80 ntBASIC4.65□□□□□ -1.67
CDX1P47902 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.65□□□□□ -1.67
CDX1P47902 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.65□□□□□ -1.67
CDX1P47902 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.65□□□□□ -1.67
CDX1P47902 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
CDX1P47902 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDX1P47902 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CDX1P47902 SAMMSON-213ENST00000641336 1521 ntBASIC4.65□□□□□ -1.67
CDX1P47902 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDX1P47902 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.67
CDX1P47902 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDX1P47902 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDX1P47902 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDX1P47902 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDX1P47902 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.64□□□□□ -1.67
CDX1P47902 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.64□□□□□ -1.67
CDX1P47902 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.64□□□□□ -1.67
CDX1P47902 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.64□□□□□ -1.67
CDX1P47902 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.64□□□□□ -1.67
CDX1P47902 CCT8P1-201ENST00000413611 1657 ntBASIC4.64□□□□□ -1.67
CDX1P47902 ADAM5-202ENST00000399789 1942 ntBASIC4.64□□□□□ -1.67
CDX1P47902 AC083843.2-201ENST00000568248 6253 ntBASIC4.64□□□□□ -1.67
CDX1P47902 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 AC083843.3-201ENST00000623679 2186 ntBASIC4.64□□□□□ -1.67
CDX1P47902 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.64□□□□□ -1.67
CDX1P47902 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CDX1P47902 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.64□□□□□ -1.67
CDX1P47902 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CDX1P47902 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 RNA5SP435-201ENST00000364044 108 ntBASIC4.64□□□□□ -1.67
CDX1P47902 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
CDX1P47902 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 AL096711.1-201ENST00000404780 554 ntBASIC4.64□□□□□ -1.67
CDX1P47902 RPS3AP2-201ENST00000407190 754 ntBASIC4.64□□□□□ -1.67
CDX1P47902 MIR1203-201ENST00000408812 85 ntBASIC4.64□□□□□ -1.67
CDX1P47902 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.64□□□□□ -1.67
CDX1P47902 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.64□□□□□ -1.67
CDX1P47902 MTCO1P52-201ENST00000433928 531 ntBASIC4.64□□□□□ -1.67
CDX1P47902 NDUFS5P5-201ENST00000437256 321 ntBASIC4.64□□□□□ -1.67
CDX1P47902 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.64□□□□□ -1.67
CDX1P47902 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms