Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 NTS-203ENST00000551529 801 ntTSL 3 BASIC6.06□□□□□ -1.44
ATF4P18848 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.06□□□□□ -1.44
ATF4P18848 AC090971.3-201ENST00000557871 1041 ntBASIC6.06□□□□□ -1.44
ATF4P18848 HSPE1P3-201ENST00000559254 309 ntBASIC6.06□□□□□ -1.44
ATF4P18848 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.06□□□□□ -1.44
ATF4P18848 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.06□□□□□ -1.44
ATF4P18848 AC008392.1-201ENST00000600941 437 ntTSL 2 BASIC6.06□□□□□ -1.44
ATF4P18848 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.06□□□□□ -1.44
ATF4P18848 AC122710.3-201ENST00000606566 541 ntBASIC6.06□□□□□ -1.44
ATF4P18848 U1.25-201ENST00000614085 162 ntBASIC6.06□□□□□ -1.44
ATF4P18848 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC6.06□□□□□ -1.44
ATF4P18848 ST7-OT4_3.1-201ENST00000615542 293 ntBASIC6.06□□□□□ -1.44
ATF4P18848 MESTIT1_2.1-201ENST00000616328 235 ntBASIC6.06□□□□□ -1.44
ATF4P18848 AC116165.2-201ENST00000616705 206 ntBASIC6.06□□□□□ -1.44
ATF4P18848 AC099811.5-201ENST00000617211 819 ntTSL 5 BASIC6.06□□□□□ -1.44
ATF4P18848 AL136967.1-201ENST00000625120 441 ntBASIC6.06□□□□□ -1.44
ATF4P18848 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.06□□□□□ -1.44
ATF4P18848 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
ATF4P18848 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATF4P18848 AL592429.1-201ENST00000403909 1473 ntBASIC6.06□□□□□ -1.44
ATF4P18848 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATF4P18848 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
ATF4P18848 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATF4P18848 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
ATF4P18848 AC093536.2-201ENST00000565257 1406 ntBASIC6.06□□□□□ -1.44
ATF4P18848 PLCE1-AS2-202ENST00000432782 1612 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATF4P18848 AL121839.2-201ENST00000565058 6943 ntBASIC6.06□□□□□ -1.44
ATF4P18848 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
ATF4P18848 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATF4P18848 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.06□□□□□ -1.44
ATF4P18848 ZC3H14-203ENST00000318308 1384 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATF4P18848 PARP4P2-201ENST00000446672 3326 ntBASIC6.05□□□□□ -1.44
ATF4P18848 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
ATF4P18848 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
ATF4P18848 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ATF4P18848 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ATF4P18848 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.05□□□□□ -1.44
ATF4P18848 AP002800.1-201ENST00000624982 2225 ntBASIC6.05□□□□□ -1.44
ATF4P18848 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ATF4P18848 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.05□□□□□ -1.44
ATF4P18848 AC062029.1-202ENST00000606164 3651 ntBASIC6.05□□□□□ -1.44
ATF4P18848 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
ATF4P18848 RBMX2P2-201ENST00000257020 946 ntBASIC6.05□□□□□ -1.44
ATF4P18848 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ATF4P18848 RNA5SP71-201ENST00000362967 126 ntBASIC6.05□□□□□ -1.44
ATF4P18848 RNU4-59P-201ENST00000364447 116 ntBASIC6.05□□□□□ -1.44
ATF4P18848 RNU5E-5P-201ENST00000365379 116 ntBASIC6.05□□□□□ -1.44
ATF4P18848 RNU4-2-201ENST00000365668 141 ntBASIC6.05□□□□□ -1.44
ATF4P18848 MRPL55-211ENST00000366738 705 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ATF4P18848 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC6.05□□□□□ -1.44
ATF4P18848 SNORA35-201ENST00000386104 128 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AL161787.1-201ENST00000401543 174 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AL451061.1-201ENST00000407887 862 ntBASIC6.05□□□□□ -1.44
ATF4P18848 RNU2-66P-201ENST00000410650 161 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC6.05□□□□□ -1.44
ATF4P18848 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC6.05□□□□□ -1.44
ATF4P18848 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC6.05□□□□□ -1.44
ATF4P18848 MTCYBP5-201ENST00000423752 1135 ntBASIC6.05□□□□□ -1.44
ATF4P18848 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ATF4P18848 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC6.05□□□□□ -1.44
ATF4P18848 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC6.05□□□□□ -1.44
ATF4P18848 AKR1B10P1-201ENST00000425765 942 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC6.05□□□□□ -1.44
ATF4P18848 RPL36P19-201ENST00000430744 301 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC6.05□□□□□ -1.44
ATF4P18848 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC6.05□□□□□ -1.44
ATF4P18848 MTND1P4-201ENST00000435196 415 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC6.05□□□□□ -1.44
ATF4P18848 AC091862.1-201ENST00000438016 1100 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AC007790.1-201ENST00000439081 782 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC6.05□□□□□ -1.44
ATF4P18848 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.05□□□□□ -1.44
ATF4P18848 Z82173.1-201ENST00000453924 484 ntTSL 3 BASIC6.05□□□□□ -1.44
ATF4P18848 TPT1P7-201ENST00000458300 517 ntBASIC6.05□□□□□ -1.44
ATF4P18848 SNRPCP3-201ENST00000474888 476 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AC104763.1-201ENST00000475274 360 ntBASIC6.05□□□□□ -1.44
ATF4P18848 SNRPD2P1-201ENST00000489253 354 ntBASIC6.05□□□□□ -1.44
ATF4P18848 RPL7P24-201ENST00000493052 752 ntBASIC6.05□□□□□ -1.44
ATF4P18848 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC6.05□□□□□ -1.44
ATF4P18848 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.05□□□□□ -1.44
ATF4P18848 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC6.05□□□□□ -1.44
ATF4P18848 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.05□□□□□ -1.44
ATF4P18848 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC6.05□□□□□ -1.44
ATF4P18848 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC6.05□□□□□ -1.44
ATF4P18848 RFPL4AP5-201ENST00000514977 504 ntBASIC6.05□□□□□ -1.44
ATF4P18848 IGHVII-22-1-201ENST00000517888 265 ntBASIC6.05□□□□□ -1.44
ATF4P18848 LINC01170-201ENST00000519703 406 ntTSL 5 BASIC6.05□□□□□ -1.44
ATF4P18848 IGLVIV-59-201ENST00000520218 250 ntBASIC6.05□□□□□ -1.44
ATF4P18848 PTK2-241ENST00000522950 548 ntTSL 4 BASIC6.05□□□□□ -1.44
ATF4P18848 MTND6P20-201ENST00000522986 418 ntBASIC6.05□□□□□ -1.44
ATF4P18848 OPRK1-204ENST00000524278 1195 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ATF4P18848 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ATF4P18848 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC6.05□□□□□ -1.44
ATF4P18848 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC6.05□□□□□ -1.44
ATF4P18848 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC6.05□□□□□ -1.44
ATF4P18848 PCNPP1-201ENST00000552501 511 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC6.05□□□□□ -1.44
ATF4P18848 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC6.05□□□□□ -1.44
ATF4P18848 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC6.05□□□□□ -1.44
ATF4P18848 MIR4504-201ENST00000577413 92 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms