Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
APOBP04114 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
APOBP04114 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
APOBP04114 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
APOBP04114 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
APOBP04114 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC3.01□□□□□ -1.93
APOBP04114 RNA5SP345-201ENST00000410646 108 ntBASIC3.01□□□□□ -1.93
APOBP04114 UQCRBP1-201ENST00000421129 336 ntBASIC3.01□□□□□ -1.93
APOBP04114 AL590399.2-201ENST00000427536 309 ntBASIC3.01□□□□□ -1.93
APOBP04114 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC3.01□□□□□ -1.93
APOBP04114 RPS17P8-201ENST00000434525 335 ntBASIC3.01□□□□□ -1.93
APOBP04114 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC3.01□□□□□ -1.93
APOBP04114 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
APOBP04114 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC3.01□□□□□ -1.93
APOBP04114 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
APOBP04114 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
APOBP04114 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
APOBP04114 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
APOBP04114 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
APOBP04114 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
APOBP04114 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
APOBP04114 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
APOBP04114 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
APOBP04114 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
APOBP04114 RNU1-82P-201ENST00000390851 165 ntBASIC3.01□□□□□ -1.93
APOBP04114 AC053481.1-201ENST00000467217 306 ntBASIC3.01□□□□□ -1.93
APOBP04114 IMPA1P1-201ENST00000510718 842 ntBASIC3.01□□□□□ -1.93
APOBP04114 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.01□□□□□ -1.93
APOBP04114 AC010476.1-201ENST00000519111 851 ntBASIC3.01□□□□□ -1.93
APOBP04114 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC3.01□□□□□ -1.93
APOBP04114 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
APOBP04114 CCNG2P1-201ENST00000549521 1000 ntBASIC3.01□□□□□ -1.93
APOBP04114 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC3.01□□□□□ -1.93
APOBP04114 AL139254.3-201ENST00000641097 674 ntBASIC3.01□□□□□ -1.93
APOBP04114 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC3.01□□□□□ -1.93
APOBP04114 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
APOBP04114 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
APOBP04114 CASC19-243ENST00000641588 1546 ntBASIC3.01□□□□□ -1.93
APOBP04114 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
APOBP04114 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC3.01□□□□□ -1.93
APOBP04114 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
APOBP04114 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC3.01□□□□□ -1.93
APOBP04114 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3□□□□□ -1.93
APOBP04114 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3□□□□□ -1.93
APOBP04114 SNORA63.1-201ENST00000362493 131 ntBASIC3□□□□□ -1.93
APOBP04114 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3□□□□□ -1.93
APOBP04114 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC3□□□□□ -1.93
APOBP04114 RPL23AP2-201ENST00000471227 466 ntBASIC3□□□□□ -1.93
APOBP04114 AC091959.2-201ENST00000477363 321 ntBASIC3□□□□□ -1.93
APOBP04114 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC3□□□□□ -1.93
APOBP04114 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC3□□□□□ -1.93
APOBP04114 AC136777.2-201ENST00000522979 358 ntBASIC3□□□□□ -1.93
APOBP04114 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3□□□□□ -1.93
APOBP04114 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC3□□□□□ -1.93
APOBP04114 MIR6875-201ENST00000617506 72 ntBASIC3□□□□□ -1.93
APOBP04114 AL034408.1-201ENST00000637712 664 ntBASIC3□□□□□ -1.93
APOBP04114 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC3□□□□□ -1.93
APOBP04114 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC3□□□□□ -1.93
APOBP04114 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
APOBP04114 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
APOBP04114 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
APOBP04114 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC3□□□□□ -1.93
APOBP04114 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
APOBP04114 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
APOBP04114 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC3□□□□□ -1.93
APOBP04114 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC3□□□□□ -1.93
APOBP04114 AL500522.2-201ENST00000448562 343 ntBASIC3□□□□□ -1.93
APOBP04114 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC3□□□□□ -1.93
APOBP04114 RNU1-88P-201ENST00000459274 128 ntBASIC3□□□□□ -1.93
APOBP04114 RN7SL558P-201ENST00000497468 299 ntBASIC3□□□□□ -1.93
APOBP04114 BUD31P1-201ENST00000521828 359 ntBASIC3□□□□□ -1.93
APOBP04114 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC3□□□□□ -1.93
APOBP04114 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3□□□□□ -1.93
APOBP04114 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
APOBP04114 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3□□□□□ -1.93
APOBP04114 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
APOBP04114 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
APOBP04114 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
APOBP04114 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC3□□□□□ -1.93
APOBP04114 AC009643.2-201ENST00000603543 1448 ntBASIC3□□□□□ -1.93
APOBP04114 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
APOBP04114 LRRC37BP1-201ENST00000398851 714 ntBASIC3□□□□□ -1.93
APOBP04114 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
APOBP04114 SCAND3P1-201ENST00000439854 1060 ntBASIC3□□□□□ -1.93
APOBP04114 AC245028.2-201ENST00000458673 253 ntBASIC3□□□□□ -1.93
APOBP04114 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3□□□□□ -1.93
APOBP04114 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC3□□□□□ -1.93
APOBP04114 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3□□□□□ -1.93
APOBP04114 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3□□□□□ -1.93
APOBP04114 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC3□□□□□ -1.93
APOBP04114 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC3□□□□□ -1.93
APOBP04114 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC3□□□□□ -1.93
APOBP04114 AP003400.2-201ENST00000624036 666 ntBASIC3□□□□□ -1.93
APOBP04114 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3□□□□□ -1.93
APOBP04114 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
APOBP04114 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3□□□□□ -1.93
APOBP04114 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
APOBP04114 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
APOBP04114 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3□□□□□ -1.93
APOBP04114 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms