Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MIR506-201ENST00000384998 124 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 MIR498-201ENST00000385134 124 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
PDGFAP04085 AL512422.1-201ENST00000407033 553 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.79□□□□□ -1.32
PDGFAP04085 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PDGFAP04085 PRUNEP1-201ENST00000425846 705 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 MTCO2P11-201ENST00000431069 680 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.79□□□□□ -1.32
PDGFAP04085 AC092106.2-201ENST00000436597 487 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.79□□□□□ -1.32
PDGFAP04085 AC064862.5-201ENST00000440618 334 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC6.79□□□□□ -1.32
PDGFAP04085 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC6.79□□□□□ -1.32
PDGFAP04085 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC6.79□□□□□ -1.32
PDGFAP04085 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC6.79□□□□□ -1.32
PDGFAP04085 CYCSP44-201ENST00000448560 313 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC6.79□□□□□ -1.32
PDGFAP04085 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PDGFAP04085 RPL26P30-201ENST00000453533 435 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 OR7E7P-201ENST00000455678 1012 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PDGFAP04085 MED28P7-201ENST00000456611 530 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 VN1R6P-201ENST00000458417 907 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 AL161747.1-201ENST00000480068 358 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 AC009153.1-201ENST00000485799 496 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 AP005202.1-201ENST00000489915 867 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 SNRPCP11-201ENST00000492453 205 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 MTCYBP17-201ENST00000503579 789 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 NACAP5-201ENST00000509863 636 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
PDGFAP04085 AC024589.1-201ENST00000512207 263 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.79□□□□□ -1.32
PDGFAP04085 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.79□□□□□ -1.32
PDGFAP04085 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
PDGFAP04085 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.79□□□□□ -1.32
PDGFAP04085 AP001893.2-201ENST00000526949 202 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.79□□□□□ -1.32
PDGFAP04085 AC022878.1-201ENST00000530684 149 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
PDGFAP04085 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.79□□□□□ -1.32
PDGFAP04085 RAB11AP2-201ENST00000545905 639 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC6.79□□□□□ -1.32
PDGFAP04085 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC6.79□□□□□ -1.32
PDGFAP04085 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
PDGFAP04085 AC018558.5-201ENST00000565840 952 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC6.79□□□□□ -1.32
PDGFAP04085 AC141257.3-201ENST00000572906 215 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 AL049634.3-201ENST00000604968 457 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 AC010200.2-201ENST00000605098 235 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PDGFAP04085 AC103710.4-201ENST00000609301 899 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.79□□□□□ -1.32
PDGFAP04085 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC6.79□□□□□ -1.32
PDGFAP04085 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.79□□□□□ -1.32
PDGFAP04085 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
PDGFAP04085 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.79□□□□□ -1.32
PDGFAP04085 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PDGFAP04085 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
PDGFAP04085 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PDGFAP04085 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PDGFAP04085 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.79□□□□□ -1.32
PDGFAP04085 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PDGFAP04085 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PDGFAP04085 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PDGFAP04085 DDX10P2-201ENST00000417796 2614 ntBASIC6.79□□□□□ -1.32
PDGFAP04085 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.78□□□□□ -1.32
PDGFAP04085 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
PDGFAP04085 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.78□□□□□ -1.32
PDGFAP04085 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC6.78□□□□□ -1.32
PDGFAP04085 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PDGFAP04085 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.78□□□□□ -1.32
PDGFAP04085 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
PDGFAP04085 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PDGFAP04085 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.78□□□□□ -1.32
PDGFAP04085 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PDGFAP04085 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
PDGFAP04085 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PDGFAP04085 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC6.78□□□□□ -1.32
PDGFAP04085 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PDGFAP04085 Y_RNA.38-201ENST00000362617 102 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 MIR187-201ENST00000385062 109 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PDGFAP04085 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.78□□□□□ -1.32
PDGFAP04085 RN7SKP148-201ENST00000410179 275 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 RPS3AP3-201ENST00000411933 242 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 FCF1P2-201ENST00000415284 583 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PDGFAP04085 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.78□□□□□ -1.32
PDGFAP04085 RABEPKP1-201ENST00000440529 1026 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC6.78□□□□□ -1.32
PDGFAP04085 AL512605.1-202ENST00000441919 381 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.78□□□□□ -1.32
PDGFAP04085 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.78□□□□□ -1.32
PDGFAP04085 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC6.78□□□□□ -1.32
PDGFAP04085 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC6.78□□□□□ -1.32
PDGFAP04085 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.78□□□□□ -1.32
PDGFAP04085 AC005017.1-201ENST00000482002 490 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 RN7SL332P-201ENST00000482163 254 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms