Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC008507.2-201ENST00000588402 1176 ntBASIC5.02□□□□□ -1.61
ZIC3O60481 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
ZIC3O60481 AC006116.5-201ENST00000591936 559 ntBASIC5.02□□□□□ -1.61
ZIC3O60481 AC011492.1-201ENST00000600023 315 ntBASIC5.02□□□□□ -1.61
ZIC3O60481 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.02□□□□□ -1.61
ZIC3O60481 AC124016.2-201ENST00000610058 665 ntBASIC5.02□□□□□ -1.61
ZIC3O60481 MIR6886-201ENST00000619864 61 ntBASIC5.02□□□□□ -1.61
ZIC3O60481 AC126544.2-201ENST00000625174 749 ntBASIC5.02□□□□□ -1.61
ZIC3O60481 AC013437.2-201ENST00000639587 677 ntBASIC5.02□□□□□ -1.61
ZIC3O60481 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.02□□□□□ -1.61
ZIC3O60481 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ZIC3O60481 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.02□□□□□ -1.61
ZIC3O60481 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.02□□□□□ -1.61
ZIC3O60481 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.02□□□□□ -1.61
ZIC3O60481 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
ZIC3O60481 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.02□□□□□ -1.61
ZIC3O60481 MTND5P11-201ENST00000511037 1812 ntBASIC5.02□□□□□ -1.61
ZIC3O60481 AL442128.2-201ENST00000620246 1824 ntBASIC5.02□□□□□ -1.61
ZIC3O60481 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
ZIC3O60481 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
ZIC3O60481 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
ZIC3O60481 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.01□□□□□ -1.61
ZIC3O60481 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
ZIC3O60481 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
ZIC3O60481 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.01□□□□□ -1.61
ZIC3O60481 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
ZIC3O60481 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ZIC3O60481 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
ZIC3O60481 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ZIC3O60481 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ZIC3O60481 RNA5SP319-201ENST00000362768 119 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 RNA5SP234-201ENST00000363916 119 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.01□□□□□ -1.61
ZIC3O60481 AL034403.1-201ENST00000399414 885 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 HMGB3P19-201ENST00000403971 560 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 RNU2-17P-201ENST00000410290 190 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 MTCO2P8-201ENST00000412213 658 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 RPA2P2-201ENST00000419698 796 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 TCEA1P2-201ENST00000420496 906 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.01□□□□□ -1.61
ZIC3O60481 FO393414.1-201ENST00000428697 1184 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.01□□□□□ -1.61
ZIC3O60481 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.01□□□□□ -1.61
ZIC3O60481 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.01□□□□□ -1.61
ZIC3O60481 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.01□□□□□ -1.61
ZIC3O60481 RPS26P41-201ENST00000450370 284 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 HMGB1P26-201ENST00000452520 628 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 OFD1P3Y-201ENST00000453312 783 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 AC239798.3-201ENST00000454459 408 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.01□□□□□ -1.61
ZIC3O60481 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.01□□□□□ -1.61
ZIC3O60481 CBX1P5-201ENST00000475330 559 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 AC098583.1-201ENST00000480875 255 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.01□□□□□ -1.61
ZIC3O60481 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ZIC3O60481 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ZIC3O60481 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.01□□□□□ -1.61
ZIC3O60481 AC133963.2-201ENST00000513686 578 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 RN7SKP34-201ENST00000516142 244 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.01□□□□□ -1.61
ZIC3O60481 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.01□□□□□ -1.61
ZIC3O60481 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.01□□□□□ -1.61
ZIC3O60481 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.01□□□□□ -1.61
ZIC3O60481 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
ZIC3O60481 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.01□□□□□ -1.61
ZIC3O60481 AC116158.1-201ENST00000560231 2129 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.01□□□□□ -1.61
ZIC3O60481 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.01□□□□□ -1.61
ZIC3O60481 AL049838.1-201ENST00000563647 981 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 MIR3176-201ENST00000582210 90 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.01□□□□□ -1.61
ZIC3O60481 AC068020.1-201ENST00000594215 661 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 AC130352.1-201ENST00000602979 661 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.01□□□□□ -1.61
ZIC3O60481 AC022467.1-201ENST00000614738 749 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 AC007204.2-201ENST00000615022 616 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 AC084824.4-201ENST00000620106 731 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ZIC3O60481 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ZIC3O60481 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ZIC3O60481 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ZIC3O60481 MTCO1P11-201ENST00000429111 1528 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ZIC3O60481 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.01□□□□□ -1.61
ZIC3O60481 DNM1P47-203ENST00000571780 12667 ntBASIC5.01□□□□□ -1.61
ZIC3O60481 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
ZIC3O60481 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
ZIC3O60481 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ZIC3O60481 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ZIC3O60481 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ZIC3O60481 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ZIC3O60481 MSL3P1-202ENST00000440028 1468 ntBASIC5□□□□□ -1.61
ZIC3O60481 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ZIC3O60481 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5□□□□□ -1.61
ZIC3O60481 SAMMSON-210ENST00000641260 1308 ntBASIC5□□□□□ -1.61
ZIC3O60481 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ZIC3O60481 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ZIC3O60481 RNU6-468P-201ENST00000384003 109 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms