Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC138907.8-201ENST00000623981 2256 ntBASIC5.6□□□□□ -1.51
PCDH17O14917 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDH17O14917 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDH17O14917 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
PCDH17O14917 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDH17O14917 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDH17O14917 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDH17O14917 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDH17O14917 MRRFP1-201ENST00000435941 1675 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDH17O14917 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDH17O14917 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDH17O14917 PDZK1P1-202ENST00000425209 1350 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDH17O14917 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDH17O14917 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDH17O14917 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDH17O14917 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDH17O14917 SELENOWP1-201ENST00000322792 252 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 RNU1-150P-201ENST00000362491 162 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 RN7SKP292-201ENST00000365522 317 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 MIR142-201ENST00000384835 87 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PCDH17O14917 RNU6-298P-201ENST00000390888 96 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 ANAPC10P1-201ENST00000395991 556 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 AL136131.1-201ENST00000406079 803 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 AP000357.1-201ENST00000409926 1165 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 AC010385.1-201ENST00000412374 256 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 AL445213.1-201ENST00000412589 747 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 AC016769.2-201ENST00000414815 475 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 AC099677.3-201ENST00000427081 395 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 AC073410.1-201ENST00000435125 589 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 AL445928.1-201ENST00000435545 222 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 RPL12P18-201ENST00000437175 325 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDH17O14917 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDH17O14917 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.59□□□□□ -1.51
PCDH17O14917 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.59□□□□□ -1.51
PCDH17O14917 RN7SL269P-201ENST00000467795 305 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.59□□□□□ -1.51
PCDH17O14917 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDH17O14917 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDH17O14917 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDH17O14917 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDH17O14917 CYB5AP5-201ENST00000549779 389 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
PCDH17O14917 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDH17O14917 TXNP4-201ENST00000575018 310 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDH17O14917 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDH17O14917 AC145423.1-201ENST00000605712 336 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 FAM72A-208ENST00000607379 1139 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 AL356274.1-201ENST00000617064 410 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 AL445670.1-201ENST00000618889 801 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDH17O14917 OR8G3P-202ENST00000641572 1255 ntBASIC5.59□□□□□ -1.51
PCDH17O14917 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
PCDH17O14917 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
PCDH17O14917 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDH17O14917 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PCDH17O14917 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
PCDH17O14917 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.59□□□□□ -1.52
PCDH17O14917 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
PCDH17O14917 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
PCDH17O14917 AC005224.3-201ENST00000584683 2140 ntBASIC5.59□□□□□ -1.52
PCDH17O14917 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PCDH17O14917 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PCDH17O14917 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDH17O14917 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDH17O14917 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
PCDH17O14917 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDH17O14917 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDH17O14917 TMSB4XP2-201ENST00000335179 210 ntBASIC5.58□□□□□ -1.52
PCDH17O14917 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDH17O14917 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PCDH17O14917 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
PCDH17O14917 HMGB3P7-201ENST00000400214 611 ntBASIC5.58□□□□□ -1.52
PCDH17O14917 ZNF602P-201ENST00000405929 924 ntBASIC5.58□□□□□ -1.52
PCDH17O14917 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDH17O14917 MTCO2P23-201ENST00000425216 680 ntBASIC5.58□□□□□ -1.52
PCDH17O14917 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDH17O14917 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDH17O14917 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.58□□□□□ -1.52
PCDH17O14917 NDUFS5P5-201ENST00000437256 321 ntBASIC5.58□□□□□ -1.52
PCDH17O14917 CACYBPP1-201ENST00000438592 684 ntBASIC5.58□□□□□ -1.52
PCDH17O14917 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDH17O14917 RPS7P3-201ENST00000443360 580 ntBASIC5.58□□□□□ -1.52
PCDH17O14917 CUBNP2-201ENST00000443534 1139 ntBASIC5.58□□□□□ -1.52
PCDH17O14917 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDH17O14917 AP006222.1-205ENST00000450734 457 ntBASIC5.58□□□□□ -1.52
PCDH17O14917 AC008280.2-201ENST00000455473 307 ntBASIC5.58□□□□□ -1.52
PCDH17O14917 OSTCP1-201ENST00000455507 450 ntBASIC5.58□□□□□ -1.52
PCDH17O14917 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDH17O14917 RN7SL177P-201ENST00000476596 299 ntBASIC5.58□□□□□ -1.52
PCDH17O14917 ST13P12-201ENST00000508958 1094 ntBASIC5.58□□□□□ -1.52
PCDH17O14917 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDH17O14917 AC114781.3-201ENST00000512083 142 ntBASIC5.58□□□□□ -1.52
PCDH17O14917 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDH17O14917 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms