Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 Y_RNA.72-201ENST00000362894 103 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 RNU6-115P-201ENST00000364310 107 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 COQ3-202ENST00000369240 646 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AL450338.1-201ENST00000407987 512 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 VN1R33P-201ENST00000411800 887 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 RSU1P3-201ENST00000412878 835 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 SPA17P1-201ENST00000416656 452 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 SNRPEP10-201ENST00000420249 274 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 USP9YP36-201ENST00000424581 829 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 OR5P4P-201ENST00000424698 917 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 HSPD1P12-201ENST00000429127 1069 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 C1DP4-201ENST00000455429 424 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 RPS18P13-201ENST00000461260 454 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC097493.1-201ENST00000463958 372 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 RPSAP48-201ENST00000466509 889 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC017015.1-201ENST00000477387 286 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 KLRA1P-201ENST00000503499 986 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 snoU109.5-201ENST00000516231 132 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 HIGD1AP6-201ENST00000521833 279 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 NMNAT1P1-201ENST00000554095 876 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC244034.2-201ENST00000562504 509 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AL845331.3-202ENST00000562856 261 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC090751.1-201ENST00000566966 267 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC022916.3-201ENST00000592961 742 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC079315.1-201ENST00000602952 623 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AL162413.1-201ENST00000603198 110 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AL161729.3-201ENST00000603533 673 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC013553.2-201ENST00000604244 589 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC139792.3-201ENST00000623525 224 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC129778.1-202ENST00000623812 261 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AL591379.1-207ENST00000635982 261 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC138915.4-201ENST00000565549 4147 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 AC006378.2-201ENST00000623178 2476 ntBASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHGA11Q9Y5H2 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 DDX18P4-201ENST00000511690 1966 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 AC034111.1-201ENST00000562143 3770 ntBASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHGA11Q9Y5H2 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms