Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RNU6-533P-201ENST00000384144 107 ntBASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 MTCYBP4-201ENST00000401524 249 ntBASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 AC096644.2-201ENST00000429278 159 ntBASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 HIGD1AP16-201ENST00000450986 258 ntBASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 AC012181.1-201ENST00000479895 423 ntBASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 RPL17P2-201ENST00000491913 451 ntBASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 AC138409.2-202ENST00000507274 458 ntBASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 Y_RNA.672-201ENST00000516289 104 ntBASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 RNU6-445P-201ENST00000516949 107 ntBASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 AP003467.2-201ENST00000520175 319 ntBASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 ST13P6-201ENST00000522430 1102 ntBASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 AP000790.1-201ENST00000528891 737 ntBASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 AP000676.2-201ENST00000529711 301 ntBASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 HNRNPA1P71-201ENST00000559135 950 ntBASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 GTF2IP8-201ENST00000560687 584 ntBASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 AC026464.5-201ENST00000562497 722 ntBASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 AC090236.2-201ENST00000587933 1101 ntBASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 AC012640.3-201ENST00000607847 430 ntBASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 AC083806.3-201ENST00000614016 455 ntBASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 HOTTIP_2.1-201ENST00000616633 376 ntBASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 AC233309.1-201ENST00000619522 751 ntBASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TRIM35Q9UPQ4 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AC133552.3-201ENST00000572236 1869 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AC011447.7-201ENST00000624228 1590 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AC125232.1-201ENST00000452554 1408 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 OR51A10P-201ENST00000307165 937 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 RNU5D-1-201ENST00000363299 116 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 Y_RNA.381-201ENST00000365666 102 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 RNU6-31P-201ENST00000384388 108 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 RAB5CP1-201ENST00000395972 580 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 DNAJA1P4-201ENST00000406473 1166 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 RPL12P10-201ENST00000413498 498 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AL356968.1-201ENST00000416622 474 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 CYP4F34P-201ENST00000425951 481 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AMYP1-201ENST00000440059 1023 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 GTF2F2P2-201ENST00000445825 721 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 RN7SL870P-201ENST00000460111 296 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AC091564.1-201ENST00000464563 479 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AC025164.1-201ENST00000496249 478 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AC108078.3-201ENST00000502633 489 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AP005597.2-201ENST00000526238 341 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AC024224.1-201ENST00000538284 609 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 RRN3P3-201ENST00000549207 578 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AC013283.1-201ENST00000557282 492 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AC079075.1-201ENST00000559543 878 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 ZNF322P1-201ENST00000568013 1209 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AC112187.2-201ENST00000604345 283 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AL008723.3-201ENST00000608926 449 ntBASIC9.6□□□□□ -0.87
TRIM35Q9UPQ4 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC9.6□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms