Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 AC025588.2-201ENST00000604851 466 ntBASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 AC015849.2-201ENST00000605738 409 ntBASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 AC080013.3-201ENST00000606839 578 ntBASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 AC092106.3-201ENST00000611308 722 ntBASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 AC009318.3-201ENST00000616916 503 ntBASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 RN7SL544P-201ENST00000617232 284 ntBASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 RN7SL763P-201ENST00000620922 284 ntBASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 AL691477.1-201ENST00000624398 162 ntBASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
LRIT1Q9P2V4 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 SAMM50P1-201ENST00000455403 1399 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 PROS2P-201ENST00000474651 1951 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 RNA5SP46-201ENST00000362370 120 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 MIR1302-8-201ENST00000408342 128 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 AL158825.1-201ENST00000414735 521 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 UBE2V1P9-201ENST00000414760 368 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 HIGD1AP4-201ENST00000430194 280 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 DEFA9P-201ENST00000433042 285 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 HMGB3P24-201ENST00000433260 622 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 AC096638.2-201ENST00000434965 711 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 AC093166.4-201ENST00000457867 318 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 RPS12P31-201ENST00000491419 398 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 AC118282.2-201ENST00000508739 374 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 AC007225.2-201ENST00000562529 256 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 GARSP1-201ENST00000570895 719 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 MIR4260-201ENST00000583107 67 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 MTCO3P22-201ENST00000603219 784 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 FO393422.1-201ENST00000603908 708 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 AL589674.2-201ENST00000604304 337 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 AC015922.4-201ENST00000612568 690 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 MIR6826-201ENST00000617808 98 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 FRG1EP-201ENST00000634469 770 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 AC087565.3-203ENST00000641018 837 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 OR11H2-202ENST00000641517 1085 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 MSL3P1-202ENST00000440028 1468 ntBASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRIT1Q9P2V4 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms