Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.9□□□□□ -1.3
SHKBP1Q8TBC3 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SHKBP1Q8TBC3 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.9□□□□□ -1.31
SHKBP1Q8TBC3 SMG1P5-202ENST00000529428 4219 ntBASIC6.9□□□□□ -1.31
SHKBP1Q8TBC3 SMG1P2-201ENST00000566127 4221 ntBASIC6.9□□□□□ -1.31
SHKBP1Q8TBC3 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SHKBP1Q8TBC3 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SHKBP1Q8TBC3 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
SHKBP1Q8TBC3 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
SHKBP1Q8TBC3 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SHKBP1Q8TBC3 OLMALINC-203ENST00000641087 3779 ntBASIC6.9□□□□□ -1.31
SHKBP1Q8TBC3 AL355852.1-201ENST00000454081 1771 ntBASIC6.9□□□□□ -1.31
SHKBP1Q8TBC3 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.9□□□□□ -1.31
SHKBP1Q8TBC3 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
SHKBP1Q8TBC3 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
SHKBP1Q8TBC3 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AC007382.1-201ENST00000624376 2618 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AC022905.1-201ENST00000503430 3048 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AL591848.4-201ENST00000567832 3472 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 STAG3L4-201ENST00000352103 530 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 RN7SKP237-201ENST00000364663 301 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 SNORA40.2-201ENST00000390847 128 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 RNU6-932P-201ENST00000391108 106 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 SNORD115-47-201ENST00000391226 86 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 NPM1P36-201ENST00000415681 835 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 OR4K6P-201ENST00000416478 897 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 C1DP2-201ENST00000418167 426 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 USP9YP8-201ENST00000441913 500 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 RPS27P5-201ENST00000444247 244 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 SNRPGP9-201ENST00000456025 225 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AP000852.1-201ENST00000472460 573 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AC026826.1-201ENST00000493002 361 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AC104090.1-201ENST00000506341 1171 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AC113347.3-201ENST00000509113 148 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 RNU6-1153P-201ENST00000516760 105 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AC008429.2-201ENST00000523057 864 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AC006512.2-201ENST00000543250 486 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AL591767.3-201ENST00000554632 525 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 FXNP1-201ENST00000555153 337 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AC002519.2-203ENST00000567043 837 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AC011921.2-201ENST00000589465 152 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 EIF1P6-201ENST00000600054 334 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AC091768.1-201ENST00000609258 930 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AC019278.1-201ENST00000623516 479 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AP000577.1-201ENST00000624366 878 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AC093278.2-201ENST00000564956 2485 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 AL117339.4-201ENST00000608335 7063 ntBASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SHKBP1Q8TBC3 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SHKBP1Q8TBC3 AP003486.1-201ENST00000525716 3994 ntBASIC6.88□□□□□ -1.31
SHKBP1Q8TBC3 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SHKBP1Q8TBC3 AL136531.3-201ENST00000624378 3658 ntBASIC6.88□□□□□ -1.31
SHKBP1Q8TBC3 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.88□□□□□ -1.31
SHKBP1Q8TBC3 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SHKBP1Q8TBC3 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.88□□□□□ -1.31
SHKBP1Q8TBC3 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SHKBP1Q8TBC3 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.88□□□□□ -1.31
SHKBP1Q8TBC3 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SHKBP1Q8TBC3 IFIT1P1-201ENST00000400497 1449 ntBASIC6.88□□□□□ -1.31
SHKBP1Q8TBC3 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SHKBP1Q8TBC3 AC011504.1-201ENST00000623331 4103 ntBASIC6.88□□□□□ -1.31
SHKBP1Q8TBC3 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SHKBP1Q8TBC3 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SHKBP1Q8TBC3 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms