Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.99□□□□□ -1.29
CCDC144BQ3MJ40 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.99□□□□□ -1.29
CCDC144BQ3MJ40 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.99□□□□□ -1.29
CCDC144BQ3MJ40 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCDC144BQ3MJ40 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CCDC144BQ3MJ40 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CCDC144BQ3MJ40 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CCDC144BQ3MJ40 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCDC144BQ3MJ40 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CCDC144BQ3MJ40 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CCDC144BQ3MJ40 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
CCDC144BQ3MJ40 AF287957.1-201ENST00000607368 1595 ntBASIC6.99□□□□□ -1.29
CCDC144BQ3MJ40 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCDC144BQ3MJ40 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.99□□□□□ -1.29
CCDC144BQ3MJ40 AL359091.1-201ENST00000449048 1734 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 AC100871.1-201ENST00000507871 1456 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 AC096921.2-201ENST00000561507 1916 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 RN7SKP292-201ENST00000365522 317 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 MTCO1P56-201ENST00000401674 224 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 AL590399.4-201ENST00000436561 601 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 MTND1P26-201ENST00000440488 538 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 HMGB3P6-201ENST00000444896 598 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 FTLP8-201ENST00000446770 267 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 VPS25P1-201ENST00000455691 508 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 CDC42P1-201ENST00000456658 548 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 AC008565.1-201ENST00000509046 885 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 SCARNA18.1-201ENST00000516330 83 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 AC008429.4-201ENST00000521201 182 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 AP000619.2-201ENST00000546014 969 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 AC009120.3-201ENST00000563335 499 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 MIR4675-201ENST00000577898 77 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 AC004890.3-201ENST00000605566 1095 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 MIR6793-201ENST00000612376 63 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 MFSD8-220ENST00000641243 1422 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 AC011416.1-201ENST00000514947 1732 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 CIR1P2-201ENST00000514821 1342 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 AC007842.1-201ENST00000597336 2039 ntBASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC144BQ3MJ40 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 NSRP1P1-201ENST00000444067 1693 ntBASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 RNU4-51P-201ENST00000364206 140 ntBASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 RNU4-68P-201ENST00000364314 141 ntBASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 MIR1203-201ENST00000408812 85 ntBASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 BTF3P8-201ENST00000414577 526 ntBASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 CR769776.1-201ENST00000441254 787 ntBASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 AL035551.1-201ENST00000446931 348 ntBASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 AP006222.1-205ENST00000450734 457 ntBASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 RANP2-201ENST00000456833 229 ntBASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms