Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RN7SKP115-201ENST00000363177 317 ntBASIC5.24□□□□□ -1.57
PDX1P52945 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.24□□□□□ -1.57
PDX1P52945 RNU6-883P-201ENST00000384597 107 ntBASIC5.24□□□□□ -1.57
PDX1P52945 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PDX1P52945 AL589655.1-201ENST00000405398 482 ntBASIC5.24□□□□□ -1.57
PDX1P52945 AL009179.1-201ENST00000406085 265 ntBASIC5.24□□□□□ -1.57
PDX1P52945 OR4K12P-201ENST00000406538 961 ntBASIC5.24□□□□□ -1.57
PDX1P52945 U3.36-201ENST00000408418 213 ntBASIC5.24□□□□□ -1.57
PDX1P52945 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.24□□□□□ -1.57
PDX1P52945 MRPS21P2-201ENST00000424704 264 ntBASIC5.24□□□□□ -1.57
PDX1P52945 AC138761.5-201ENST00000433967 325 ntBASIC5.24□□□□□ -1.57
PDX1P52945 H2AFZP6-201ENST00000444403 394 ntBASIC5.24□□□□□ -1.57
PDX1P52945 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.24□□□□□ -1.57
PDX1P52945 RN7SL97P-201ENST00000486780 299 ntBASIC5.24□□□□□ -1.57
PDX1P52945 RWDD4P1-201ENST00000488019 565 ntBASIC5.24□□□□□ -1.57
PDX1P52945 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDX1P52945 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.24□□□□□ -1.57
PDX1P52945 NDUFB5P1-201ENST00000508134 564 ntBASIC5.24□□□□□ -1.57
PDX1P52945 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.24□□□□□ -1.57
PDX1P52945 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.24□□□□□ -1.57
PDX1P52945 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.24□□□□□ -1.57
PDX1P52945 OR7E10P-201ENST00000526420 991 ntBASIC5.24□□□□□ -1.57
PDX1P52945 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.24□□□□□ -1.57
PDX1P52945 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.24□□□□□ -1.57
PDX1P52945 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.24□□□□□ -1.57
PDX1P52945 MIR4646-201ENST00000580775 63 ntBASIC5.24□□□□□ -1.57
PDX1P52945 AL583832.1-201ENST00000603227 784 ntBASIC5.24□□□□□ -1.57
PDX1P52945 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.24□□□□□ -1.57
PDX1P52945 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.24□□□□□ -1.57
PDX1P52945 LINC00216-201ENST00000623548 1126 ntBASIC5.24□□□□□ -1.57
PDX1P52945 AP001784.1-201ENST00000624107 428 ntBASIC5.24□□□□□ -1.57
PDX1P52945 AC005618.4-201ENST00000625053 554 ntBASIC5.24□□□□□ -1.57
PDX1P52945 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.24□□□□□ -1.57
PDX1P52945 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDX1P52945 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDX1P52945 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.24□□□□□ -1.57
PDX1P52945 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDX1P52945 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDX1P52945 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
PDX1P52945 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.24□□□□□ -1.57
PDX1P52945 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.23□□□□□ -1.57
PDX1P52945 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.23□□□□□ -1.57
PDX1P52945 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDX1P52945 AL022311.1-201ENST00000623726 19416 ntBASIC5.23□□□□□ -1.57
PDX1P52945 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
PDX1P52945 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PDX1P52945 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.23□□□□□ -1.57
PDX1P52945 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDX1P52945 MIR365B-201ENST00000362317 111 ntBASIC5.23□□□□□ -1.57
PDX1P52945 RPL37P18-201ENST00000411602 243 ntBASIC5.23□□□□□ -1.57
PDX1P52945 CBX1P3-201ENST00000413296 527 ntBASIC5.23□□□□□ -1.57
PDX1P52945 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.23□□□□□ -1.57
PDX1P52945 RPA2P2-201ENST00000419698 796 ntBASIC5.23□□□□□ -1.57
PDX1P52945 SETP9-201ENST00000423837 832 ntBASIC5.23□□□□□ -1.57
PDX1P52945 SETP10-201ENST00000424368 814 ntBASIC5.23□□□□□ -1.57
PDX1P52945 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.23□□□□□ -1.57
PDX1P52945 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.23□□□□□ -1.57
PDX1P52945 AC012497.1-201ENST00000429392 575 ntBASIC5.23□□□□□ -1.57
PDX1P52945 BX276092.6-201ENST00000430476 250 ntBASIC5.23□□□□□ -1.57
PDX1P52945 AL590762.3-201ENST00000436372 640 ntBASIC5.23□□□□□ -1.57
PDX1P52945 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.23□□□□□ -1.57
PDX1P52945 MTND4P15-201ENST00000437913 1033 ntBASIC5.23□□□□□ -1.57
PDX1P52945 AL691517.1-201ENST00000440833 1235 ntBASIC5.23□□□□□ -1.57
PDX1P52945 BX276092.8-201ENST00000455722 250 ntBASIC5.23□□□□□ -1.57
PDX1P52945 SNORD125-201ENST00000459538 96 ntBASIC5.23□□□□□ -1.57
PDX1P52945 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.23□□□□□ -1.57
PDX1P52945 RN7SL860P-201ENST00000473738 223 ntBASIC5.23□□□□□ -1.57
PDX1P52945 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.23□□□□□ -1.57
PDX1P52945 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.23□□□□□ -1.57
PDX1P52945 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDX1P52945 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PDX1P52945 RN7SKP253-201ENST00000516424 309 ntBASIC5.23□□□□□ -1.57
PDX1P52945 RN7SKP66-201ENST00000516681 231 ntBASIC5.23□□□□□ -1.57
PDX1P52945 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.23□□□□□ -1.57
PDX1P52945 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.23□□□□□ -1.57
PDX1P52945 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.23□□□□□ -1.57
PDX1P52945 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.23□□□□□ -1.57
PDX1P52945 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PDX1P52945 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.23□□□□□ -1.57
PDX1P52945 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.23□□□□□ -1.57
PDX1P52945 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.23□□□□□ -1.57
PDX1P52945 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.23□□□□□ -1.57
PDX1P52945 AC009163.6-201ENST00000612367 342 ntBASIC5.23□□□□□ -1.57
PDX1P52945 AP002799.1-201ENST00000623552 423 ntBASIC5.23□□□□□ -1.57
PDX1P52945 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.23□□□□□ -1.57
PDX1P52945 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
PDX1P52945 MT-RNR2-201ENST00000387347 1559 ntBASIC5.23□□□□□ -1.57
PDX1P52945 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PDX1P52945 OR4F13P-202ENST00000560066 2054 ntBASIC5.23□□□□□ -1.57
PDX1P52945 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.23□□□□□ -1.57
PDX1P52945 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDX1P52945 AP000473.2-201ENST00000602659 1537 ntBASIC5.23□□□□□ -1.57
PDX1P52945 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDX1P52945 AC112255.1-201ENST00000624070 2493 ntBASIC5.22□□□□□ -1.57
PDX1P52945 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDX1P52945 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
PDX1P52945 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.22□□□□□ -1.57
PDX1P52945 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PDX1P52945 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDX1P52945 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms