Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 H3F3AP5-201ENST00000475267 429 ntBASIC5.12□□□□□ -1.59
SOX2P48431 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.12□□□□□ -1.59
SOX2P48431 AC023050.1-201ENST00000498198 304 ntBASIC5.12□□□□□ -1.59
SOX2P48431 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.12□□□□□ -1.59
SOX2P48431 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.12□□□□□ -1.59
SOX2P48431 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.12□□□□□ -1.59
SOX2P48431 CR383658.1-201ENST00000514609 734 ntBASIC5.12□□□□□ -1.59
SOX2P48431 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.12□□□□□ -1.59
SOX2P48431 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.12□□□□□ -1.59
SOX2P48431 HIGD1AP18-201ENST00000520730 278 ntBASIC5.12□□□□□ -1.59
SOX2P48431 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.12□□□□□ -1.59
SOX2P48431 AL121594.2-201ENST00000541658 472 ntBASIC5.12□□□□□ -1.59
SOX2P48431 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.12□□□□□ -1.59
SOX2P48431 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.12□□□□□ -1.59
SOX2P48431 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.12□□□□□ -1.59
SOX2P48431 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SOX2P48431 MTND4P33-201ENST00000556706 766 ntBASIC5.12□□□□□ -1.59
SOX2P48431 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SOX2P48431 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.12□□□□□ -1.59
SOX2P48431 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.12□□□□□ -1.59
SOX2P48431 LINC00556-201ENST00000569603 412 ntBASIC5.12□□□□□ -1.59
SOX2P48431 AL163952.1-202ENST00000569625 600 ntBASIC5.12□□□□□ -1.59
SOX2P48431 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SOX2P48431 TXNP4-201ENST00000575018 310 ntBASIC5.12□□□□□ -1.59
SOX2P48431 RBM22P1-201ENST00000578589 1214 ntBASIC5.12□□□□□ -1.59
SOX2P48431 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.12□□□□□ -1.59
SOX2P48431 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.12□□□□□ -1.59
SOX2P48431 AC093783.1-201ENST00000612976 329 ntBASIC5.12□□□□□ -1.59
SOX2P48431 AL121890.3-201ENST00000618494 516 ntBASIC5.12□□□□□ -1.59
SOX2P48431 AC073569.3-201ENST00000619055 682 ntBASIC5.12□□□□□ -1.59
SOX2P48431 AC091304.6-201ENST00000619761 202 ntBASIC5.12□□□□□ -1.59
SOX2P48431 AP002782.1-201ENST00000623107 614 ntBASIC5.12□□□□□ -1.59
SOX2P48431 AL357562.1-201ENST00000624911 609 ntBASIC5.12□□□□□ -1.59
SOX2P48431 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SOX2P48431 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
SOX2P48431 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SOX2P48431 AL592429.1-201ENST00000403909 1473 ntBASIC5.12□□□□□ -1.59
SOX2P48431 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
SOX2P48431 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SOX2P48431 CASC19-281ENST00000642118 1554 ntBASIC5.12□□□□□ -1.59
SOX2P48431 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.12□□□□□ -1.59
SOX2P48431 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.11□□□□□ -1.59
SOX2P48431 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SOX2P48431 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
SOX2P48431 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.11□□□□□ -1.59
SOX2P48431 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SOX2P48431 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.11□□□□□ -1.59
SOX2P48431 MFSD8-239ENST00000641590 2479 ntBASIC5.11□□□□□ -1.59
SOX2P48431 RN7SKP78-201ENST00000364711 318 ntBASIC5.11□□□□□ -1.59
SOX2P48431 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SOX2P48431 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.11□□□□□ -1.59
SOX2P48431 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SOX2P48431 RNU6-636P-201ENST00000384598 107 ntBASIC5.11□□□□□ -1.59
SOX2P48431 RNA5SP91-201ENST00000390902 119 ntBASIC5.11□□□□□ -1.59
SOX2P48431 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SOX2P48431 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.11□□□□□ -1.59
SOX2P48431 HMGB1P49-201ENST00000418882 569 ntBASIC5.11□□□□□ -1.59
SOX2P48431 RPS3AP37-201ENST00000419176 745 ntBASIC5.11□□□□□ -1.59
SOX2P48431 AL365338.1-201ENST00000422282 858 ntBASIC5.11□□□□□ -1.59
SOX2P48431 VN1R20P-201ENST00000425215 966 ntBASIC5.11□□□□□ -1.59
SOX2P48431 RPSAP65-201ENST00000429660 595 ntBASIC5.11□□□□□ -1.59
SOX2P48431 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.11□□□□□ -1.59
SOX2P48431 GAPDHP34-201ENST00000432112 823 ntBASIC5.11□□□□□ -1.59
SOX2P48431 AC084290.1-201ENST00000434995 374 ntBASIC5.11□□□□□ -1.59
SOX2P48431 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.11□□□□□ -1.59
SOX2P48431 MTND2P40-201ENST00000436718 841 ntBASIC5.11□□□□□ -1.59
SOX2P48431 ARMC4P1-201ENST00000438905 707 ntBASIC5.11□□□□□ -1.59
SOX2P48431 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SOX2P48431 OR51B8P-201ENST00000449892 769 ntBASIC5.11□□□□□ -1.59
SOX2P48431 AL445991.1-201ENST00000450381 475 ntBASIC5.11□□□□□ -1.59
SOX2P48431 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SOX2P48431 VN1R40P-201ENST00000455196 941 ntBASIC5.11□□□□□ -1.59
SOX2P48431 AC004129.2-201ENST00000457229 287 ntBASIC5.11□□□□□ -1.59
SOX2P48431 ABCC13-202ENST00000463099 3842 ntBASIC5.11□□□□□ -1.59
SOX2P48431 AP000563.1-201ENST00000490865 758 ntBASIC5.11□□□□□ -1.59
SOX2P48431 AC114324.2-202ENST00000503812 134 ntBASIC5.11□□□□□ -1.59
SOX2P48431 AC105313.1-201ENST00000509121 353 ntBASIC5.11□□□□□ -1.59
SOX2P48431 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.11□□□□□ -1.59
SOX2P48431 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.11□□□□□ -1.59
SOX2P48431 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.11□□□□□ -1.59
SOX2P48431 RNA5SP96-201ENST00000516041 107 ntBASIC5.11□□□□□ -1.59
SOX2P48431 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.11□□□□□ -1.59
SOX2P48431 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.11□□□□□ -1.59
SOX2P48431 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.11□□□□□ -1.59
SOX2P48431 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.11□□□□□ -1.59
SOX2P48431 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.11□□□□□ -1.59
SOX2P48431 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.11□□□□□ -1.59
SOX2P48431 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.11□□□□□ -1.59
SOX2P48431 NPIPB14P-203ENST00000532298 987 ntBASIC5.11□□□□□ -1.59
SOX2P48431 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.11□□□□□ -1.59
SOX2P48431 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.11□□□□□ -1.59
SOX2P48431 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.11□□□□□ -1.59
SOX2P48431 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.11□□□□□ -1.59
SOX2P48431 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.11□□□□□ -1.59
SOX2P48431 RBM22P12-201ENST00000567098 1255 ntBASIC5.11□□□□□ -1.59
SOX2P48431 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.11□□□□□ -1.59
SOX2P48431 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.11□□□□□ -1.59
SOX2P48431 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.11□□□□□ -1.59
SOX2P48431 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.11□□□□□ -1.59
SOX2P48431 SMIM12P1-201ENST00000603004 274 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms