Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC009117.1-201ENST00000563948 554 ntBASIC5.44□□□□□ -1.54
HOXA9P31269 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXA9P31269 MIR4330-201ENST00000579077 105 ntBASIC5.44□□□□□ -1.54
HOXA9P31269 MIR4737-201ENST00000583979 81 ntBASIC5.44□□□□□ -1.54
HOXA9P31269 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXA9P31269 RNU6-84P-201ENST00000607737 102 ntBASIC5.44□□□□□ -1.54
HOXA9P31269 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA9P31269 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.44□□□□□ -1.54
HOXA9P31269 BCORP1-203ENST00000513194 5093 ntBASIC5.44□□□□□ -1.54
HOXA9P31269 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA9P31269 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXA9P31269 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA9P31269 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXA9P31269 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA9P31269 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA9P31269 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA9P31269 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA9P31269 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
HOXA9P31269 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA9P31269 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA9P31269 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXA9P31269 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HOXA9P31269 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA9P31269 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA9P31269 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXA9P31269 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXA9P31269 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA9P31269 RNU1-74P-201ENST00000384108 171 ntBASIC5.43□□□□□ -1.54
HOXA9P31269 CYB5AP4-201ENST00000396692 399 ntBASIC5.43□□□□□ -1.54
HOXA9P31269 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
HOXA9P31269 RPS4XP9-201ENST00000405151 780 ntBASIC5.43□□□□□ -1.54
HOXA9P31269 FAR2P2-201ENST00000413041 594 ntBASIC5.43□□□□□ -1.54
HOXA9P31269 CBX1P3-201ENST00000413296 527 ntBASIC5.43□□□□□ -1.54
HOXA9P31269 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA9P31269 AL590139.1-201ENST00000416267 400 ntBASIC5.43□□□□□ -1.54
HOXA9P31269 FAR2P4-202ENST00000425399 584 ntBASIC5.43□□□□□ -1.54
HOXA9P31269 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXA9P31269 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXA9P31269 CEACAMP9-201ENST00000442990 513 ntBASIC5.43□□□□□ -1.54
HOXA9P31269 CBX1P2-201ENST00000453841 458 ntBASIC5.43□□□□□ -1.54
HOXA9P31269 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.43□□□□□ -1.54
HOXA9P31269 AC091544.1-201ENST00000484702 348 ntBASIC5.43□□□□□ -1.54
HOXA9P31269 RN7SL244P-201ENST00000493405 297 ntBASIC5.43□□□□□ -1.54
HOXA9P31269 AC093890.1-201ENST00000502554 540 ntBASIC5.43□□□□□ -1.54
HOXA9P31269 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.43□□□□□ -1.54
HOXA9P31269 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXA9P31269 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXA9P31269 SNORA70.11-201ENST00000515987 138 ntBASIC5.43□□□□□ -1.54
HOXA9P31269 SNORA70.13-201ENST00000516116 138 ntBASIC5.43□□□□□ -1.54
HOXA9P31269 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXA9P31269 AC021006.3-201ENST00000530771 192 ntBASIC5.43□□□□□ -1.54
HOXA9P31269 OR4A43P-201ENST00000532938 908 ntBASIC5.43□□□□□ -1.54
HOXA9P31269 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA9P31269 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.43□□□□□ -1.54
HOXA9P31269 BGLT3-201ENST00000564523 994 ntBASIC5.43□□□□□ -1.54
HOXA9P31269 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXA9P31269 Z95327.3-201ENST00000610385 572 ntBASIC5.43□□□□□ -1.54
HOXA9P31269 AC099654.6-201ENST00000636487 512 ntBASIC5.43□□□□□ -1.54
HOXA9P31269 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA9P31269 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA9P31269 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA9P31269 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXA9P31269 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
HOXA9P31269 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXA9P31269 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HOXA9P31269 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
HOXA9P31269 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXA9P31269 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
HOXA9P31269 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA9P31269 AC004158.1-201ENST00000564508 4319 ntBASIC5.42□□□□□ -1.54
HOXA9P31269 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXA9P31269 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXA9P31269 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXA9P31269 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXA9P31269 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXA9P31269 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXA9P31269 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
HOXA9P31269 AL138820.1-201ENST00000617901 5305 ntBASIC5.42□□□□□ -1.54
HOXA9P31269 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXA9P31269 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HOXA9P31269 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXA9P31269 RNA5SP428-201ENST00000365129 132 ntBASIC5.42□□□□□ -1.54
HOXA9P31269 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXA9P31269 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXA9P31269 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXA9P31269 MIR192-201ENST00000384915 110 ntBASIC5.42□□□□□ -1.54
HOXA9P31269 RPL26P29-201ENST00000415623 438 ntBASIC5.42□□□□□ -1.54
HOXA9P31269 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.42□□□□□ -1.54
HOXA9P31269 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXA9P31269 NDUFB4P8-201ENST00000435351 367 ntBASIC5.42□□□□□ -1.54
HOXA9P31269 RHOT1P3-201ENST00000436571 331 ntBASIC5.42□□□□□ -1.54
HOXA9P31269 PRPF38AP2-201ENST00000438179 851 ntBASIC5.42□□□□□ -1.54
HOXA9P31269 AL138878.2-201ENST00000440581 1241 ntBASIC5.42□□□□□ -1.54
HOXA9P31269 CEACAMP10-202ENST00000495431 496 ntBASIC5.42□□□□□ -1.54
HOXA9P31269 OR51K1P-201ENST00000510214 950 ntBASIC5.42□□□□□ -1.54
HOXA9P31269 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXA9P31269 AL671862.1-201ENST00000515851 349 ntBASIC5.42□□□□□ -1.54
HOXA9P31269 AC079064.1-201ENST00000528365 362 ntBASIC5.42□□□□□ -1.54
HOXA9P31269 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
HOXA9P31269 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms