Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
CFTRP13569 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CFTRP13569 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
CFTRP13569 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CFTRP13569 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
CFTRP13569 AL390316.1-201ENST00000406279 553 ntBASIC8.45□□□□□ -1.06
CFTRP13569 AC108751.3-201ENST00000461814 1020 ntBASIC8.45□□□□□ -1.06
CFTRP13569 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC8.45□□□□□ -1.06
CFTRP13569 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC8.45□□□□□ -1.06
CFTRP13569 AC022726.1-201ENST00000587475 207 ntBASIC8.45□□□□□ -1.06
CFTRP13569 AC108359.1-201ENST00000616451 1211 ntBASIC8.45□□□□□ -1.06
CFTRP13569 AL596275.2-208ENST00000641192 594 ntBASIC8.45□□□□□ -1.06
CFTRP13569 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC8.45□□□□□ -1.06
CFTRP13569 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
CFTRP13569 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
CFTRP13569 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC8.45□□□□□ -1.06
CFTRP13569 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CFTRP13569 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC8.45□□□□□ -1.06
CFTRP13569 AC092681.1-201ENST00000297369 291 ntBASIC8.45□□□□□ -1.06
CFTRP13569 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CFTRP13569 RAD23BP1-201ENST00000421404 1227 ntBASIC8.45□□□□□ -1.06
CFTRP13569 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC8.45□□□□□ -1.06
CFTRP13569 RPL21P129-201ENST00000491732 478 ntBASIC8.45□□□□□ -1.06
CFTRP13569 MIR7853-201ENST00000584820 132 ntBASIC8.45□□□□□ -1.06
CFTRP13569 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC8.45□□□□□ -1.06
CFTRP13569 AC004232.3-201ENST00000622977 525 ntBASIC8.45□□□□□ -1.06
CFTRP13569 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC8.45□□□□□ -1.06
CFTRP13569 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CFTRP13569 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
CFTRP13569 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
CFTRP13569 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC8.44□□□□□ -1.06
CFTRP13569 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
CFTRP13569 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC8.44□□□□□ -1.06
CFTRP13569 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CFTRP13569 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CFTRP13569 AC093671.1-201ENST00000624981 2929 ntBASIC8.44□□□□□ -1.06
CFTRP13569 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
CFTRP13569 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CFTRP13569 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CFTRP13569 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC8.44□□□□□ -1.06
CFTRP13569 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC8.44□□□□□ -1.06
CFTRP13569 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CFTRP13569 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
CFTRP13569 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
CFTRP13569 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CFTRP13569 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.44□□□□□ -1.06
CFTRP13569 UQCRBP1-201ENST00000421129 336 ntBASIC8.44□□□□□ -1.06
CFTRP13569 CDC27P1-201ENST00000445384 715 ntBASIC8.44□□□□□ -1.06
CFTRP13569 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC8.44□□□□□ -1.06
CFTRP13569 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC8.44□□□□□ -1.06
CFTRP13569 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC8.44□□□□□ -1.06
CFTRP13569 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC8.44□□□□□ -1.06
CFTRP13569 AC100847.1-201ENST00000611316 481 ntBASIC8.44□□□□□ -1.06
CFTRP13569 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CFTRP13569 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CFTRP13569 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC8.44□□□□□ -1.06
CFTRP13569 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CFTRP13569 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC8.43□□□□□ -1.06
CFTRP13569 AL355488.2-201ENST00000609909 2850 ntBASIC8.43□□□□□ -1.06
CFTRP13569 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CFTRP13569 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC8.43□□□□□ -1.06
CFTRP13569 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CFTRP13569 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
CFTRP13569 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CFTRP13569 MFSD8-220ENST00000641243 1422 ntBASIC8.43□□□□□ -1.06
CFTRP13569 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
CFTRP13569 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
CFTRP13569 AC007998.4-201ENST00000612496 2533 ntBASIC8.43□□□□□ -1.06
CFTRP13569 OFD1P9Y-201ENST00000417699 1491 ntBASIC8.43□□□□□ -1.06
CFTRP13569 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
CFTRP13569 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CFTRP13569 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
CFTRP13569 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
CFTRP13569 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CFTRP13569 RNA5SP223-201ENST00000365174 120 ntBASIC8.43□□□□□ -1.06
CFTRP13569 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
CFTRP13569 AL357515.1-201ENST00000402967 542 ntBASIC8.43□□□□□ -1.06
CFTRP13569 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC8.43□□□□□ -1.06
CFTRP13569 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC8.43□□□□□ -1.06
CFTRP13569 AL590399.2-201ENST00000427536 309 ntBASIC8.43□□□□□ -1.06
CFTRP13569 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC8.43□□□□□ -1.06
CFTRP13569 AL691482.1-201ENST00000453255 87 ntBASIC8.43□□□□□ -1.06
CFTRP13569 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC8.43□□□□□ -1.06
CFTRP13569 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC8.43□□□□□ -1.06
CFTRP13569 AC093840.1-201ENST00000511599 336 ntBASIC8.43□□□□□ -1.06
CFTRP13569 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC8.43□□□□□ -1.06
CFTRP13569 RN7SKP248-201ENST00000516278 305 ntBASIC8.43□□□□□ -1.06
CFTRP13569 AP000619.2-201ENST00000546014 969 ntBASIC8.43□□□□□ -1.06
CFTRP13569 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC8.43□□□□□ -1.06
CFTRP13569 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC8.43□□□□□ -1.06
CFTRP13569 MIR5699-201ENST00000578903 90 ntBASIC8.43□□□□□ -1.06
CFTRP13569 MIR3939-201ENST00000582614 106 ntBASIC8.43□□□□□ -1.06
CFTRP13569 AC093227.2-201ENST00000589357 285 ntBASIC8.43□□□□□ -1.06
CFTRP13569 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC8.43□□□□□ -1.06
CFTRP13569 VN1R85P-201ENST00000601587 426 ntBASIC8.43□□□□□ -1.06
CFTRP13569 AC005618.4-201ENST00000625053 554 ntBASIC8.43□□□□□ -1.06
CFTRP13569 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC8.43□□□□□ -1.06
CFTRP13569 AC108751.5-201ENST00000492880 1336 ntBASIC8.43□□□□□ -1.06
CFTRP13569 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CFTRP13569 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms